RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 SELENONQ9NZV5 590 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 DCDC2Q9UHG0 476 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 TSPAN16Q9UKR8 245 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 POLR2AP24928 1970 aaKnown RBP13.74□□□□□ -0.21
LRCH3-203ENST00000425562 LACTBL1A8MY62 500 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 AP1G1O43747 822 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 COQ9O75208 318 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 SH3BGRP55822 239 aaPredicted RBP13.74□□□□□ -0.21
LRCH3-203ENST00000425562 APOFQ13790 326 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 PIGGQ5H8A4 983 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 FSTL4Q6MZW2 842 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 PMF1Q6P1K2 205 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 PATL1Q86TB9 770 aaKnown RBP13.74□□□□□ -0.21
LRCH3-203ENST00000425562 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
LRCH3-203ENST00000425562 DNAAF3Q8N9W5 541 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 ZNF696Q9H7X3 374 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 PDGFCQ9NRA1 345 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 INIPQ9NRY2 104 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 CDY2AQ9Y6F7 541 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 CDY1Q9Y6F8 540 aa13.74□□□□□ -0.21
LRCH3-203ENST00000425562 RGSL1A5PLK6 1076 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 ZNF839A8K0R7 811 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 MED7O43513 233 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 PIM1P11309 404 aaPredicted RBP13.73□□□□□ -0.21
LRCH3-203ENST00000425562 GRK2P25098 689 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 SDC4P31431 198 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 NDST1P52848 882 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 FAM160B1Q5W0V3 765 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 EFCAB12Q6NXP0 572 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 OFCC1Q8IZS5 231 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 SLC45A3Q96JT2 553 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 FRMD8P1Q9BZ68 369 aaPredicted RBP13.73□□□□□ -0.21
LRCH3-203ENST00000425562 GCOM2Q9BZD3 368 aaPredicted RBP13.73□□□□□ -0.21
LRCH3-203ENST00000425562 RPF1Q9H9Y2 349 aaKnown RBP13.73□□□□□ -0.21
LRCH3-203ENST00000425562 TIMMDC1Q9NPL8 285 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 CCDC167Q9P0B6 97 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 AURKCQ9UQB9 309 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 SH3GLB1Q9Y371 365 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.73□□□□□ -0.21
LRCH3-203ENST00000425562 ZBTB42B2RXF5 422 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 MT-ND1P03886 318 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 HNRNPLP14866 589 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■■□ 21
LRCH3-203ENST00000425562 TSPAN8P19075 237 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 CD247P20963 164 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 GRIA4P48058 902 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 DGKDQ16760 1214 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 GPR107Q5VW38 600 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 ZNF772Q68DY9 489 aaPredicted RBP13.73□□□□□ -0.21
LRCH3-203ENST00000425562 ZPBP2Q6X784 338 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 TMEM176AQ96HP8 235 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 CDT1Q9H211 546 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 MTMR10Q9NXD2 777 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 PCDHB12Q9Y5F1 795 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 TLL2Q9Y6L7 1015 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 V9GYQ6 96 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 RGPD3A6NKT7 1758 aaPredicted RBP13.73□□□□□ -0.21
LRCH3-203ENST00000425562 RGPD4Q7Z3J3 1758 aa13.73□□□□□ -0.21
LRCH3-203ENST00000425562 ATP6AP2A0A1C7CYW4 349 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 A0A1W2PPW3 197 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 E7ENX8 843 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 ATP6AP2O75787 350 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 ZNF26P17031 533 aaPredicted RBP13.72□□□□□ -0.21
LRCH3-203ENST00000425562 CDH5P33151 784 aaPredicted RBP13.72□□□□□ -0.21
LRCH3-203ENST00000425562 MAGEA8P43361 318 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 OAZ1P54368 228 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 PDAP1Q13442 181 aaKnown RBP13.72□□□□□ -0.21
LRCH3-203ENST00000425562 LDLRAP1Q5SW96 308 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 SEL1L3Q68CR1 1132 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 PPP1R2P3Q6NXS1 205 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 MPZL3Q6UWV2 235 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 C16orf89Q6UX73 402 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 MOB2Q70IA6 237 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 UTS2BQ765I0 119 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 ACOT1Q86TX2 421 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 CCDC185Q8N715 623 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 ARNTL2Q8WYA1 636 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 RMND5BQ96G75 393 aaPredicted RBP13.72□□□□□ -0.21
LRCH3-203ENST00000425562 ILKAPQ9H0C8 392 aaPredicted RBP13.72□□□□□ -0.21
LRCH3-203ENST00000425562 CYP4F12Q9HCS2 524 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 SNX9Q9Y5X1 595 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 GMEB1Q9Y692 573 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 IGKV6D-21A0A0A0MT36 114 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 NEMP2A6NFY4 417 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 G3V2L1 256 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 AKAP10O43572 662 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 VTNP04004 478 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 C2P06681 752 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 LCP1P13796 627 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 TFEBP19484 476 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 NR4A1P22736 598 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 HARS2P49590 506 aaKnown RBP13.72□□□□□ -0.21
LRCH3-203ENST00000425562 PLK1P53350 603 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 CSE1LP55060 971 aaKnown RBP13.72□□□□□ -0.21
LRCH3-203ENST00000425562 GLRA4Q5JXX5 417 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 ZNF280DQ6N043 979 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 ELMSAN1Q6PJG2 1045 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 KDELC2Q7Z4H8 507 aa13.72□□□□□ -0.21
LRCH3-203ENST00000425562 RNF135Q8IUD6 432 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms