RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 DNAAF3Q8N9W5 541 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 ZNF473Q8WTR7 871 aaKnown RBP27.04■■□□□ 1.92
LDB1-202ENST00000425280 ZNF317Q96PQ6 595 aaPredicted RBP27.04■■□□□ 1.92
LDB1-202ENST00000425280 APOL2Q9BQE5 337 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 FAM107BQ9H098 131 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 ZNF180Q9UJW8 692 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 MAFFQ9ULX9 164 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 C2orf78A6NCI8 922 aa27.03■■□□□ 1.92
LDB1-202ENST00000425280 F5H5T6 163 aa27.03■■□□□ 1.92
LDB1-202ENST00000425280 KRT4P19013 534 aa27.03■■□□□ 1.92
LDB1-202ENST00000425280 HARS2P49590 506 aaKnown RBP27.03■■□□□ 1.92
LDB1-202ENST00000425280 EPHB3P54753 998 aa27.03■■□□□ 1.92
LDB1-202ENST00000425280 CRYMQ14894 314 aa27.03■■□□□ 1.92
LDB1-202ENST00000425280 C5orf22Q49AR2 442 aa27.03■■□□□ 1.92
LDB1-202ENST00000425280 FATE1Q969F0 183 aa27.03■■□□□ 1.92
LDB1-202ENST00000425280 PLD4Q96BZ4 506 aa27.03■■□□□ 1.92
LDB1-202ENST00000425280 CHMP6Q96FZ7 201 aa27.03■■□□□ 1.92
LDB1-202ENST00000425280 RNF38Q9H0F5 515 aa27.03■■□□□ 1.92
LDB1-202ENST00000425280 CXXC1Q9P0U4 656 aaPredicted RBP27.03■■□□□ 1.92
LDB1-202ENST00000425280 SMG5Q9UPR3 1016 aaKnown RBP27.03■■□□□ 1.92
LDB1-202ENST00000425280 AAR2Q9Y312 384 aaKnown RBP27.03■■□□□ 1.92
LDB1-202ENST00000425280 J3KR12 359 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 UGT1A9O60656 530 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 OAS1P00973 400 aaKnown RBP27.02■■□□□ 1.92
LDB1-202ENST00000425280 CTSAP10619 480 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 CCT5P48643 541 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 SLC18A1P54219 525 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 CREMQ03060 361 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 RFWD3Q6PCD5 774 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 TMEM150AQ86TG1 271 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 UNC5BQ8IZJ1 945 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 DYDC1Q8WWB3 177 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 PSMG2Q969U7 264 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 UGT1A7Q9HAW7 530 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 UGT1A10Q9HAW8 530 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 UGT1A8Q9HAW9 530 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 SSU72Q9NP77 194 aaKnown RBP27.02■■□□□ 1.92
LDB1-202ENST00000425280 GKN1Q9NS71 199 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 BFARQ9NZS9 450 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 STK39Q9UEW8 545 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 ANAPC1Q9H1A4 1944 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 TYROBPO43914 113 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 SPATA31D3P0C874 917 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 PPP3CCP48454 512 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 MAPKAPK2P49137 400 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 SLC11A2P49281 568 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 FPGSQ05932 587 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 NAPEPLDQ6IQ20 393 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 SPATA31D4Q6ZUB0 917 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 DENND1CQ8IV53 801 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 DENND1AQ8TEH3 1009 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 ZBED2Q9BTP6 218 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 SAMD15Q9P1V8 674 aa27.02■■□□□ 1.92
LDB1-202ENST00000425280 RAMP2O60895 175 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 ANXA9O76027 345 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 STC2O76061 302 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 MT-CYBP00156 380 aaPredicted RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 KLKB1P03952 638 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 CNPP09543 421 aaKnown RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 EN2P19622 333 aaPredicted RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 CA8P35219 290 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 TTC39BQ5VTQ0 682 aaPredicted RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 CFAP52Q8N1V2 620 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 GDAP1Q8TB36 358 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 CLP1Q92989 425 aaKnown RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 TTC17Q96AE7 1141 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 ZNF334Q9HCZ1 680 aaPredicted RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 UXTQ9UBK9 157 aaPredicted RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 PRKAG2Q9UGJ0 569 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 HSPA1AP0DMV8 641 aaKnown RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 HSPA1BP0DMV9 641 aaKnown RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 DRD4P21917 467 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 OR1E1P30953 314 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 HNRNPH2P55795 449 aaKnown RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 HNRNPDQ14103 355 aaKnown RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 POLD3Q15054 466 aaPredicted RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 CERCAMQ5T4B2 595 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 KLHL23Q8NBE8 558 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 SGSM3Q96HU1 749 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 KLF16Q9BXK1 252 aaPredicted RBP27.01■■□□□ 1.91
LDB1-202ENST00000425280 INSL6Q9Y581 213 aa27.01■■□□□ 1.91
LDB1-202ENST00000425280 ALPK3Q96L96 1907 aa27■■□□□ 1.91
LDB1-202ENST00000425280 MT-ND3P03897 115 aa27■■□□□ 1.91
LDB1-202ENST00000425280 POLBP06746 335 aa27■■□□□ 1.91
LDB1-202ENST00000425280 NPY2RP49146 381 aa27■■□□□ 1.91
LDB1-202ENST00000425280 WDR4P57081 412 aaKnown RBP27■■□□□ 1.91
LDB1-202ENST00000425280 PARP15Q460N3 678 aa27■■□□□ 1.91
LDB1-202ENST00000425280 LINC00523Q86TU6 105 aa27■■□□□ 1.91
LDB1-202ENST00000425280 TAX1BP1Q86VP1 789 aa27■■□□□ 1.91
LDB1-202ENST00000425280 CKAP2Q8WWK9 683 aa27■■□□□ 1.91
LDB1-202ENST00000425280 AZIN2Q96A70 460 aa27■■□□□ 1.91
LDB1-202ENST00000425280 SP110Q9HB58 689 aa27■■□□□ 1.91
LDB1-202ENST00000425280 NEBLO76041 1014 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 CORO1AP31146 461 aaKnown RBP26.99■■□□□ 1.91
LDB1-202ENST00000425280 RPA3P35244 121 aaPredicted RBP26.99■■□□□ 1.91
LDB1-202ENST00000425280 RENBPP51606 427 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 NIPAL4Q0D2K0 466 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 CDH17Q12864 832 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 SPANXN3Q5MJ09 141 aa26.99■■□□□ 1.91
LDB1-202ENST00000425280 CES3Q6UWW8 571 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms