RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 PTPN9P43378 593 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 CDO1Q16878 200 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 HLA-BQ31612 363 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 LRSAM1Q6UWE0 723 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 Q6ZVU0 165 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 STRADAQ7RTN6 431 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 OR2T34Q8NGX1 318 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 AGPAT1Q99943 283 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 C2orf49Q9BVC5 232 aaPredicted RBP22.08■■□□□ 1.13
CDCP1-202ENST00000425231 GAREM1Q9H706 876 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 EBF2Q9HAK2 575 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 PPARGC1AQ9UBK2 798 aaKnown RBP22.08■■□□□ 1.13
CDCP1-202ENST00000425231 VPS51Q9UID3 782 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 PPM1HQ9ULR3 514 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 KNL1Q8NG31 2342 aa22.08■■□□□ 1.13
CDCP1-202ENST00000425231 A0A1W2PPC4 97 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 LRRC72A6NJI9 287 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 SH3BP5O60239 455 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 GRIA4P48058 902 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 ADPRHP54922 357 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 FAM193AP78312 1265 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 C6orf118Q5T5N4 469 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 IL27RAQ6UWB1 636 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 MON1BQ7L1V2 547 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 IRF2BP2Q7Z5L9 587 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 DCAF4L2Q8NA75 395 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 OR8D1Q8WZ84 308 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 CAMK1GQ96NX5 476 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 ZYG11BQ9C0D3 744 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 CHD8Q9HCK8 2581 aa22.07■■□□□ 1.12
CDCP1-202ENST00000425231 SPAARA0A1B0GVQ0 90 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 TCRBV5S1A1TA0A578 114 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 SMTNL1A8MU46 457 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 K7ERQ8 282 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 ALOX15BO15296 676 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 CER1O95813 267 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 ZNF883P0CG24 379 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 HDAC4P56524 1084 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 NRG1Q02297 640 aaPredicted RBP22.06■■□□□ 1.12
CDCP1-202ENST00000425231 KIF19Q2TAC6 998 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 MANEALQ5VSG8 457 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 WDR59Q6PJI9 974 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.06■■□□□ 1.12
CDCP1-202ENST00000425231 DSG4Q86SJ6 1040 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 ATP11CQ8NB49 1132 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 C3orf20Q8ND61 904 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 OR7D4Q8NG98 312 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 OR14C36Q8NHC7 312 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 BAP1Q92560 729 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 FUCA2Q9BTY2 467 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 MAGEB5Q9BZ81 275 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 OR12D3Q9UGF7 316 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 ANKRD6Q9Y2G4 727 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 FNDC3AQ9Y2H6 1198 aaKnown RBP22.06■■□□□ 1.12
CDCP1-202ENST00000425231 SNX11Q9Y5W9 270 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 PLXNA2O75051 1894 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 ILVBLA1L0T0 632 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 SIGLEC16A6NMB1 481 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 PLK4O00444 970 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 CALB1P05937 261 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 FERP16591 822 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 GLDCP23378 1020 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 CCR5P51681 352 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 FOXC1Q12948 553 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 TEAD4Q15561 434 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 KCNT1Q5JUK3 1230 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 LAYNQ6UX15 382 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 ZNF783Q6ZMS7 281 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 SYT11Q9BT88 431 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 SELENOOQ9BVL4 669 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 OSBPL2Q9H1P3 480 aa22.06■■□□□ 1.12
CDCP1-202ENST00000425231 SEPT11Q9NVA2 429 aaKnown RBP22.06■■□□□ 1.12
CDCP1-202ENST00000425231 SPEGQ15772 3267 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 FAM72CH0Y354 149 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 SMAD6O43541 496 aaKnown RBP22.05■■□□□ 1.12
CDCP1-202ENST00000425231 ZMPSTE24O75844 475 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 TOP3BO95985 862 aaKnown RBP22.05■■□□□ 1.12
CDCP1-202ENST00000425231 RRM1P23921 792 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 ZNF165P49910 485 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 RACK1P63244 317 aaKnown RBP22.05■■□□□ 1.12
CDCP1-202ENST00000425231 SIM1P81133 766 aaPredicted RBP22.05■■□□□ 1.12
CDCP1-202ENST00000425231 C1QBPQ07021 282 aaKnown RBP22.05■■□□□ 1.12
CDCP1-202ENST00000425231 HNRNPDQ14103 355 aaKnown RBP22.05■■□□□ 1.12
CDCP1-202ENST00000425231 ARL13BQ3SXY8 428 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 FAM72AQ5TYM5 149 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 FAM46CQ5VWP2 391 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 FAM72DQ6L9T8 149 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 LINGO4Q6UY18 593 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 DBX2Q6ZNG2 339 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 FAM72BQ86X60 149 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 NAXDQ8IW45 347 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 OR2A12Q8NGT7 310 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 PIP4K2CQ8TBX8 421 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 FAM172AQ8WUF8 416 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 TM7SF3Q9NS93 570 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 MYO6Q9UM54 1294 aa22.05■■□□□ 1.12
CDCP1-202ENST00000425231 TMEM131Q92545 1883 aa22.04■■□□□ 1.12
CDCP1-202ENST00000425231 BNIP3LO60238 219 aa22.04■■□□□ 1.12
CDCP1-202ENST00000425231 RTN2O75298 545 aa22.04■■□□□ 1.12
CDCP1-202ENST00000425231 CCDC172P0C7W6 258 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms