RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CCNB1P14635 433 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 PSMC3P17980 439 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 CES1P23141 567 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 FDFT1P37268 417 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 PLK1P53350 603 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 GEMIN4P57678 1058 aaKnown RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 SARNPP82979 210 aaKnown RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 GPS1Q13098 491 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 PRPSAP1Q14558 356 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 DMC1Q14565 340 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 RFTN1Q14699 578 aaPredicted RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 BRD3Q15059 726 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 ANKRD20A2Q5SQ80 823 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 ANKRD20A1Q5TYW2 823 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 MARC1Q5VT66 337 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 ANKRD20A3Q5VUR7 823 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 FYB2Q5VWT5 728 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 RNF219Q5W0B1 726 aaPredicted RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 ITPRIPL1Q6GPH6 555 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 TANGO2Q6ICL3 276 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 RHBDF2Q6PJF5 856 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 ARHGEF18Q6ZSZ5 1173 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 NUDT18Q6ZVK8 323 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 TMEM25Q86YD3 366 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 MFN1Q8IWA4 741 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 NPWQ8N729 165 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 SUSD6Q92537 303 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 ARHGEF2Q92974 986 aaKnown RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 ATP2A3Q93084 1043 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 HLA-CQ95604 372 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 ACDQ96AP0 544 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 SNF8Q96H20 258 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 FEM1AQ9BSK4 669 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 ACE2Q9BYF1 805 aaPredicted RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 FOXP3Q9BZS1 431 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 MUC3BQ9H195 1237 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 NOL6Q9H6R4 1146 aaKnown RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 ANKZF1Q9H8Y5 726 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 SP110Q9HB58 689 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 NDFIP2Q9NV92 336 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 GOLGA6AQ9NYA3 693 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 EPS15L1Q9UBC2 864 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 MTRF1LQ9UGC7 380 aaKnown RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 ANAPC5Q9UJX4 755 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 SNX24Q9Y343 169 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 MFHAS1Q9Y4C4 1052 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 MYO18AQ92614 2054 aaKnown RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 MYOFQ9NZM1 2061 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 A0A0A0MRY4 1105 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 BHMG1C9JSJ3 638 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 DYNC1I1O14576 645 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 CHADO15335 359 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 TIMM44O43615 452 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 MAP3K6O95382 1288 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 PENKP01210 267 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 FOSL2P15408 326 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 TNFRSF8P28908 595 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 RPL22P35268 128 aaKnown RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 IFI35P80217 286 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 MRPS25P82663 173 aaKnown RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 SULT2A1Q06520 285 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 SMAD4Q13485 552 aaKnown RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 HLTFQ14527 1009 aaKnown RBP eCLIP10.55□□□□□ -0.72
MDC1-205ENST00000425072 E2F5Q15329 346 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 DHCR24Q15392 516 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 TRIP13Q15645 432 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 ELF2Q15723 593 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 CCDC85BQ15834 202 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 EML3Q32P44 896 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 INO80DQ53TQ3 878 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 LY6G5CQ5SRR4 150 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 RETSATQ6NUM9 610 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 POTEHQ6S545 545 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 CASKIN2Q8WXE0 1202 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 MYLIPQ8WY64 445 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 EXOC4Q96A65 974 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 TEKT5Q96M29 485 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 PRICKLE1Q96MT3 831 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 SPATA13Q96N96 652 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 LRRC3BQ96PB8 259 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 MYADMQ96S97 322 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 FAM83CQ9BQN1 747 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 C2orf49Q9BVC5 232 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 TRMT61BQ9BVS5 477 aaKnown RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 FRMD8Q9BZ67 464 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 TRIM31Q9BZY9 425 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 POMKQ9H5K3 350 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 UBE2ZQ9H832 354 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 ATP13A1Q9HD20 1204 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 RBM22Q9NW64 420 aaKnown RBP eCLIP10.55□□□□□ -0.727e-8■■□□□ 13.6
MDC1-205ENST00000425072 SEPT10Q9P0V9 454 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 USP15Q9Y4E8 981 aaPredicted RBP10.55□□□□□ -0.72
MDC1-205ENST00000425072 SHROOM3Q8TF72 1996 aa10.55□□□□□ -0.72
MDC1-205ENST00000425072 CCDC151A5D8V7 595 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 ERI2A8K979 691 aaKnown RBP10.54□□□□□ -0.72
MDC1-205ENST00000425072 E7EVH7 732 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 KCNK1O00180 336 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 AP3B1O00203 1094 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 RNF103O00237 685 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 DNALI1O14645 258 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms