RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 FEM1AQ9BSK4 669 aa12□□□□□ -0.49
TRBV22-1-201ENST00000424543 PIGVQ9NUD9 493 aa12□□□□□ -0.49
TRBV22-1-201ENST00000424543 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12□□□□□ -0.49
TRBV22-1-201ENST00000424543 SLC25A13Q9UJS0 675 aa12□□□□□ -0.49
TRBV22-1-201ENST00000424543 VPS28Q9UK41 221 aa12□□□□□ -0.49
TRBV22-1-201ENST00000424543 OR51B4Q9Y5P0 310 aa12□□□□□ -0.49
TRBV22-1-201ENST00000424543 ATMQ13315 3056 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 M0QYT0 321 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 SLC31A1O15431 190 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 LATO43561 262 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 HSF2BPO75031 334 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 DAB1O75553 588 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 ENDOD1O94919 500 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 JUPP14923 745 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 RRM1P23921 792 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 PON1P27169 355 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 CCR1P32246 355 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 NNMTP40261 264 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 PLK1P53350 603 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 RNASE9P60153 205 aaKnown RBP11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 TARDBPQ13148 414 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 KDM7AQ6ZMT4 941 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 C11orf57Q6ZUT1 292 aaPredicted RBP11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 TFAP2DQ7Z6R9 452 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 ELOA2Q8IYF1 753 aaPredicted RBP11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 SH2D3CQ8N5H7 860 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 PDCD7Q8N8D1 485 aaKnown RBP11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 SHC3Q92529 594 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 FAM131CQ96AQ9 280 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 TRIM62Q9BVG3 475 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 MUC3BQ9H195 1237 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 TNKS2Q9H2K2 1166 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 UCKL1Q9NWZ5 548 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 APEX2Q9UBZ4 518 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 SLC12A6Q9UHW9 1150 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 ACTL7AQ9Y615 435 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 COL27A1Q8IZC6 1860 aaPredicted RBP11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 CHD5Q8TDI0 1954 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 KALRNO60229 2985 aa11.99□□□□□ -0.49
TRBV22-1-201ENST00000424543 RP1P56715 2156 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 LRRK1Q38SD2 2015 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 A0A0D9SEW6 157 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 FOXN3O00409 490 aaPredicted RBP11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 TRIM38O00635 465 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 FFAR2O15552 330 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 SMAD6O43541 496 aaKnown RBP11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 ATP9BO43861 1147 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 RNGTTO60942 597 aaKnown RBP11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 PRB1P04280 392 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 RHOCP08134 193 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 SRCP12931 536 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 ZNF18P17022 549 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 CLCN1P35523 988 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 ARRB1P49407 418 aaPredicted RBP11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 SULT1E1P49888 294 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 CLDN2P57739 230 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 ZNF177Q13360 481 aaPredicted RBP11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 SLC12A1Q13621 1099 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 BECN1Q14457 450 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 MEA1Q16626 185 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 RAB6CQ53S08 254 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 PIP5KL1Q5T9C9 394 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 TTC39BQ5VTQ0 682 aaPredicted RBP11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 SFMBT2Q5VUG0 894 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 TAF3Q5VWG9 929 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 TRNP1Q6NT89 227 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 FBXL19Q6PCT2 694 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 FOXR2Q6PJQ5 311 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 GBP6Q6ZN66 633 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 PRPF39Q86UA1 669 aaKnown RBP11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 MFSD2AQ8NA29 543 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 OR7D4Q8NG98 312 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 GRIN3AQ8TCU5 1115 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 TSC1Q92574 1164 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 SKA1Q96BD8 255 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 NOX5Q96PH1 765 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 TKTL2Q9H0I9 626 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 RAB6CQ9H0N0 254 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 SYNCQ9H7C4 482 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 MPP6Q9NZW5 540 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 DKK4Q9UBT3 224 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 VPS51Q9UID3 782 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 DNAJC12Q9UKB3 198 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 PPM1HQ9ULR3 514 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 PCDHGC3Q9UN70 934 aa11.98□□□□□ -0.49
TRBV22-1-201ENST00000424543 A0A1W2PQU0 124 aa11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 C1QTNF3-AMACRE9PGA6 284 aa11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 KPNA3O00505 521 aaPredicted RBP11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 SIGLEC6O43699 453 aa11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 DFNA5O60443 496 aa11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 ZIC2O95409 532 aaPredicted RBP11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 MTIF2P46199 727 aaKnown RBP11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 SLC6A3Q01959 620 aa11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 SULT2A1Q06520 285 aa11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 SFSWAPQ12872 951 aaKnown RBP11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 EXOC3L4Q17RC7 722 aa11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 SLC45A4Q5BKX6 768 aa11.97□□□□□ -0.49
TRBV22-1-201ENST00000424543 ZNF542PQ5EBM4 170 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms