RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CHST12Q9NRB3 414 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 TLL2Q9Y6L7 1015 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 A0A096LPK6 155 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 LOC102724159A0A0B4J2E5 919 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 CPB1P15086 417 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 PCSK1P29120 753 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 SOX11P35716 441 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 PWP2Q15269 919 aaKnown RBP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 PARP6Q2NL67 630 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 ANKRD20A4Q4UJ75 823 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 LRRC8BQ6P9F7 803 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 PTAR1Q7Z6K3 402 aaPredicted RBP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 KCNMB4Q86W47 210 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 PSTKQ8IV42 348 aaKnown RBP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 ATPAF2Q8N5M1 289 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 SH3TC2Q8TF17 1288 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 KCTD4Q8WVF5 259 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 EPAS1Q99814 870 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 DMAP1Q9NPF5 467 aaPredicted RBP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 SLC38A7Q9NVC3 462 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 TAS2R1Q9NYW7 299 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 CDH9Q9ULB4 789 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 SEPT4O43236 478 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 USP1O94782 785 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 BPGMP07738 259 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 MAGEA3P43357 314 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 SLC1A6P48664 564 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 CDC42EP1Q00587 391 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 TEX44Q53QW1 395 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 TMEM198Q66K66 360 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 RSPO2Q6UXX9 243 aaPredicted RBP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 CRLF3Q8IUI8 442 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 ZNF781Q8N8C0 355 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 CDKL2Q92772 493 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 SLC45A3Q96JT2 553 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 PPP1R12CQ9BZL4 782 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 TASP1Q9H6P5 420 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 CNGB3Q9NQW8 809 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 TXLNGQ9NUQ3 528 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 EME2A4GXA9 379 aaPredicted RBP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 OPHN1O60890 802 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 ADAMTS4O75173 837 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 BAG2O95816 211 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 IRF1P10914 325 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 PAPOLAP51003 745 aaKnown RBP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 FCGRTP55899 365 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 FKBP1BP68106 108 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 TSPY1Q01534 308 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 NAA25Q14CX7 972 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 CCDC6Q16204 474 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 NXNQ6DKJ4 435 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 NT5C3BQ969T7 300 aa12.16□□□□□ -0.46
PTPRN-204ENST00000423636 FAM193BQ96PV7 902 aaPredicted RBP12.16□□□□□ -0.46
PTPRN-204ENST00000423636 A0A0U1RQF3 1178 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 GSRP00390 522 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 JUNP05412 331 aaKnown RBP12.15□□□□□ -0.46
PTPRN-204ENST00000423636 HLA-DQB2P05538 268 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 SPATA31D3P0C874 917 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 DHRS4L1P0CG22 281 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 PGAM1P18669 254 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 CDK16Q00536 496 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 USP10Q14694 798 aaKnown RBP12.15□□□□□ -0.46
PTPRN-204ENST00000423636 SPATA31D4Q6ZUB0 917 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 PPP4R1Q8TF05 950 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 GRAMD1AQ96CP6 724 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 FSD1LQ9BXM9 530 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 CCSER2Q9H7U1 834 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 WASF2Q9Y6W5 498 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 FAM155AB1AL88 458 aaPredicted RBP12.15□□□□□ -0.46
PTPRN-204ENST00000423636 C2P06681 752 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 GSTA1P08263 222 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 CKBP12277 381 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 ALADP13716 330 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 EZRP15311 586 aaKnown RBP12.15□□□□□ -0.46
PTPRN-204ENST00000423636 TPSB2P20231 275 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 DSC2Q02487 901 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 SLC10A7Q0GE19 358 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 DUSP4Q13115 394 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 THOC5Q13769 683 aaKnown RBP12.15□□□□□ -0.46
PTPRN-204ENST00000423636 PCLAFQ15004 111 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 TPSAB1Q15661 275 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 PHTF2Q8N3S3 785 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 MCUQ8NE86 351 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 DBF4BQ8NFT6 615 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 OR6P1Q8NGX9 317 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 MAPK15Q8TD08 544 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 LINC01599Q8WXQ3 324 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 TTC1Q99614 292 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTPRN-204ENST00000423636 PLA2G4CQ9UP65 541 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 CRYL1Q9Y2S2 319 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 HS3ST4Q9Y661 456 aa12.15□□□□□ -0.46
PTPRN-204ENST00000423636 ZCWPW2A0A1B0GU75 182 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 DCXO43602 365 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 GABRB3P28472 473 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 EPHA3P29320 983 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms