RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 B4GALNT4Q76KP1 1039 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 ALLCQ8N6M5 410 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.3■□□□□ 0.2
ABCA1-203ENST00000423487 DCAF4L2Q8NA75 395 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 NOA1Q8NC60 698 aaKnown RBP16.3■□□□□ 0.2
ABCA1-203ENST00000423487 LRRN4Q8WUT4 740 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 NSMCE1Q8WV22 266 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 DNASE1L2Q92874 299 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 SLCO2A1Q92959 643 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 FATE1Q969F0 183 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 ACDQ96AP0 544 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 ALG14Q96F25 216 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 LMLNQ96KR4 655 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 C10orf88Q9H8K7 445 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 USP29Q9HBJ7 922 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 GGA2Q9UJY4 613 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 SLC27A6Q9Y2P4 619 aa16.3■□□□□ 0.2
ABCA1-203ENST00000423487 ZSCAN5CA6NGD5 496 aaPredicted RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 MATN3O15232 486 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 PRAMEF11O60813 436 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 STK10O94804 968 aaKnown RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 ASGR2P07307 311 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 EIF2DP41214 584 aaKnown RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 GAB4Q2WGN9 574 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 PREPLQ4J6C6 727 aaPredicted RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 GLE1Q53GS7 698 aaKnown RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 PITRM1Q5JRX3 1037 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 ASTLQ6HA08 431 aaPredicted RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 GRAMD4Q6IC98 578 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 C8orf74Q6P047 294 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 SYDE1Q6ZW31 735 aaPredicted RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 C12orf40Q86WS4 652 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 AHI1Q8N157 1196 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 CCDC89Q8N998 374 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 FAM71DQ8N9W8 422 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 TTC8Q8TAM2 541 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 WFIKKN2Q8TEU8 576 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 ZNF599Q96NL3 588 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 EFCAB8A8MWE9 144 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 J3KR12 359 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 CBX4O00257 560 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 IFNB1P01574 187 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 CISD3P0C7P0 127 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 VAV1P15498 845 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 ACTN2P35609 894 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 PFKPQ01813 784 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 SULT2A1Q06520 285 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 HNRNPDQ14103 355 aaKnown RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 PPP1R7Q15435 360 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 RETSATQ6NUM9 610 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 KIAA0907Q7Z7F0 614 aaPredicted RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 APCDD1Q8J025 514 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 LRRN4CLQ8ND94 238 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 RTP4Q96DX8 246 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 VAT1Q99536 393 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 SEPT10Q9P0V9 454 aa16.29■□□□□ 0.2
ABCA1-203ENST00000423487 INTS6Q9UL03 887 aaKnown RBP16.29■□□□□ 0.2
ABCA1-203ENST00000423487 CXorf51AA0A1B0GTR3 108 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 FAM187AA6NFU0 413 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 KCNK1O00180 336 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 TTI1O43156 1089 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 RAD51CO43502 376 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 CCNB1P14635 433 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 PTGIRP43119 386 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 SLC6A11P48066 632 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 RENBPP51606 427 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 CLCN6P51797 869 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 GDF10P55107 478 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 GEMIN4P57678 1058 aaKnown RBP16.28■□□□□ 0.2
ABCA1-203ENST00000423487 IFI35P80217 286 aaPredicted RBP16.28■□□□□ 0.2
ABCA1-203ENST00000423487 ZP2Q05996 745 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 TDGQ13569 410 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 FUT11Q495W5 492 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 TMCO4Q5TGY1 634 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 JAMLQ86YT9 394 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 CCHCR1Q8TD31 782 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 ATXN2LQ8WWM7 1075 aaKnown RBP16.28■□□□□ 0.2
ABCA1-203ENST00000423487 MAML1Q92585 1016 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 PDFQ9HBH1 243 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 UBA2Q9UBT2 640 aaPredicted RBP16.28■□□□□ 0.2
ABCA1-203ENST00000423487 VPS51Q9UID3 782 aa16.28■□□□□ 0.2
ABCA1-203ENST00000423487 NUP205Q92621 2012 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 C5orf60A6NFR6 353 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 RNF103O00237 685 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 TRIM24O15164 1050 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 SNAP91O60641 907 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 ZMPSTE24O75844 475 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 NEBLO76041 1014 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 KRT14P02533 472 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 POLR2EP19388 210 aaKnown RBP16.27■□□□□ 0.2
ABCA1-203ENST00000423487 OPRD1P41143 372 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 NUMBP49757 651 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 SLC20A2Q08357 652 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 RFTN1Q14699 578 aaPredicted RBP16.27■□□□□ 0.2
ABCA1-203ENST00000423487 P3H1Q32P28 736 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 TEX35Q5T0J7 233 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 MARC1Q5VT66 337 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 MBLAC2Q68D91 279 aa16.27■□□□□ 0.2
ABCA1-203ENST00000423487 NUDT18Q6ZVK8 323 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms