RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 URGCPQ8TCY9 931 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 LRTOMTQ8WZ04 291 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 P2RY11Q96G91 374 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 STAG3L1P0CL83 205 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 TFEBP19484 476 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 MYO1HQ8N1T3 1032 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 PCDHAC1Q9H158 963 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 EFCAB1Q9HAE3 211 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 ZBTB26Q9HCK0 441 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 C20orf96Q9NUD7 363 aaPredicted RBP21.66■■□□□ 1.06
USP48-205ENST00000421625 ADA2Q9NZK5 511 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 ADAM28Q9UKQ2 775 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 HMGCS2P54868 508 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 CDH15P55291 814 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 INCA1Q0VD86 236 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 SREK1Q8WXA9 508 aaKnown RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 LPIN3Q9BQK8 851 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 NAT9Q9BTE0 207 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 NT5C1AQ9BXI3 368 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 FZD8Q9H461 694 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 EIF2B3Q9NR50 452 aaKnown RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 TCAF2A6NFQ2 919 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 ZBTB42B2RXF5 422 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 H6PDO95479 791 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 RPL10P27635 214 aaKnown RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 BACE1P56817 501 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 TXNL4AP83876 142 aaKnown RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 NSUN2Q08J23 767 aaKnown RBP eCLIP21.65■■□□□ 1.06
USP48-205ENST00000421625 IKBKEQ14164 716 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 PTK2BQ14289 1009 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 SPANXN3Q5MJ09 141 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 FAM160B1Q5W0V3 765 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 SETD3Q86TU7 594 aaPredicted RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 MICALL2Q8IY33 904 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 ZNF597Q96LX8 424 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 TEX13BQ9BXU2 312 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 ACE2Q9BYF1 805 aaPredicted RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 DRC3Q9H069 523 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 PDZD7Q9H5P4 517 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 ARHGEF38Q9NXL2 777 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 CNOT11Q9UKZ1 510 aaKnown RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 CDYLQ9Y232 598 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 SNX9Q9Y5X1 595 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 PLOD2O00469 737 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 PEX10O60683 326 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 TOMM70O94826 608 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 MAGEA8P43361 318 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 GMPSP49915 693 aaPredicted RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 ACOT1Q86TX2 421 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 CARM1Q86X55 608 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 PCDH20Q8N6Y1 951 aaKnown RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 WRNIP1Q96S55 665 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 SLC29A1Q99808 456 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 TMEM79Q9BSE2 394 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 C2orf40Q9H1Z8 148 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 FAF1Q9UNN5 650 aaPredicted RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 COPG1Q9Y678 874 aaKnown RBP21.65■■□□□ 1.06
USP48-205ENST00000421625 USP3Q9Y6I4 520 aa21.65■■□□□ 1.06
USP48-205ENST00000421625 GLRBP48167 497 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 NAGLUP54802 743 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 MTMR14Q8NCE2 650 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 OLAHQ9NV23 265 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.64■■□□□ 1.05
USP48-205ENST00000421625 H3BNH8 94 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 MPOP05164 745 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 SBK3P0C264 359 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 TMEM62Q0P6H9 643 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 TREML2Q5T2D2 321 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 TP53INP2Q8IXH6 220 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 ZNF567Q8N184 647 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 CCNYQ8ND76 341 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 PHIPQ8WWQ0 1821 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 ZBED3Q96IU2 234 aaPredicted RBP21.64■■□□□ 1.05
USP48-205ENST00000421625 TASP1Q9H6P5 420 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 AP4S1Q9Y587 144 aa21.64■■□□□ 1.05
USP48-205ENST00000421625 TRIM38O00635 465 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 TADA2AO75478 443 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 SAT1P21673 171 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 ATICP31939 592 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 ENTPD1P49961 510 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 OAZ1P54368 228 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 PLOD1Q02809 727 aaPredicted RBP21.63■■□□□ 1.05
USP48-205ENST00000421625 KIZQ2M2Z5 673 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 PKDCCQ504Y2 493 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 MTX3Q5HYI7 312 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 GK5Q6ZS86 529 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 EEPD1Q7L9B9 569 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 TMEM110Q86TL2 294 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.63■■□□□ 1.05
USP48-205ENST00000421625 VRTNQ9H8Y1 702 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 TMPRSS4Q9NRS4 437 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 RRN3Q9NYV6 651 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 TMEM233B4DJY2 109 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 C9IYK1 514 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 H2AFYO75367 372 aaKnown RBP21.63■■□□□ 1.05
USP48-205ENST00000421625 HERC3Q15034 1050 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 SOWAHAQ2M3V2 549 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 SMYD5Q6GMV2 418 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 BBS5Q8N3I7 341 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 NLGN2Q8NFZ4 835 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms