RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SUDS3Q9H7L9 328 aaPredicted RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 FSCN3Q9NQT6 498 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 HERC5Q9UII4 1024 aaKnown RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 SLC8A2Q9UPR5 921 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 ICKQ9UPZ9 632 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 E9PCH4 1651 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 KIF21AQ7Z4S6 1674 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 KDM5CP41229 1560 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 BIVM-ERCC5R4GMW8 1640 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 EFCAB5A4FU69 1503 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF608Q9ULD9 1512 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3DA0A087WVF3 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3IA0A087WXS9 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3EA0A087X179 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3KA0A087X1G2 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3BA6NDS4 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3FA6NER0 549 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 AQP12BA6NM10 295 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3LB9A6J9 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 F8W810 466 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 PES1O00541 588 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 PRYO14603 147 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 DNPH1O43598 174 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 CNOT3O75175 753 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 RPS6KA5O75582 802 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 SLU7O95391 586 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ADCY5O95622 1261 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3HP0C7X1 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TNNT1P13805 278 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 CFHR1Q03591 330 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 HYAL1Q12794 435 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 DHX8Q14562 1220 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 GRM4Q14833 912 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 SEC23BQ15437 767 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 AAK1Q2M2I8 961 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ANXA2RQ3ZCQ2 193 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 AP1ARQ63HQ0 302 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3GQ6DHY5 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3CQ6IPX1 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 KLHL17Q6TDP4 642 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TMCO3Q6UWJ1 677 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 SLC39A5Q6ZMH5 540 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF793Q6ZN11 406 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 RBM44Q6ZP01 1051 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 FAM57BQ71RH2 274 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 RAB11FIP2Q7L804 512 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ANKRD23Q86SG2 305 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 CCDC117Q8IWD4 279 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ADHFE1Q8IWW8 467 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3Q8IZP1 549 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 VPS37AQ8NEZ2 397 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 IGFBPL1Q8WX77 278 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 NLRP4Q96MN2 994 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 RMDN3Q96TC7 470 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 RTKNQ9BST9 563 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 HTATIP2Q9BUP3 242 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 UTP14AQ9BVJ6 771 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ELOVL1Q9BW60 279 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 KATNAL1Q9BW62 490 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TMEM120AQ9BXJ8 343 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 BRD8Q9H0E9 1235 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TMX4Q9H1E5 349 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TTC12Q9H892 705 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 SFXN1Q9H9B4 322 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 LIN7CQ9NUP9 197 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF446Q9NWS9 450 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 LRFN1Q9P244 771 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 UHRF1BP1Q6BDS2 1440 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 PCF11O94913 1555 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 PTPRCP08575 1304 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 SMARCA4P51532 1647 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 SHROOM2Q13796 1616 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ANKRD30BQ9BXX2 1392 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ABCC2Q92887 1545 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ARHGEF12Q9NZN5 1544 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 hCG_1642624A0A1W2PR95 340 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ANKRD18BA2A2Z9 1011 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 DPPA5A6NC42 116 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 LGALS16A8MUM7 142 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 RPP40O75818 363 aaKnown RBP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 CSTBP04080 98 aaKnown RBP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 CTSAP10619 480 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 KLRK1P26718 216 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ACTN2P35609 894 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 STAT6P42226 847 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 CDK7P50613 346 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF84P51523 738 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 EIF5P55010 431 aaKnown RBP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 RWDD2BP57060 319 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 TAS2R50P59544 299 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 RBM6P78332 1123 aaKnown RBP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 RNASELQ05823 741 aaKnown RBP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 DMWDQ09019 674 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 SF3A3Q12874 501 aaKnown RBP eCLIP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 TRAF1Q13077 416 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 NEDD9Q14511 834 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 KRT72Q14CN4 511 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 CCDC38Q502W7 563 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms