RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SUDS3Q9H7L9 328 aaPredicted RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 FSCN3Q9NQT6 498 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 HERC5Q9UII4 1024 aaKnown RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 SLC8A2Q9UPR5 921 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 ICKQ9UPZ9 632 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 E9PCH4 1651 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 KIF21AQ7Z4S6 1674 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 KDM5CP41229 1560 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 BIVM-ERCC5R4GMW8 1640 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 EFCAB5A4FU69 1503 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF608Q9ULD9 1512 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3DA0A087WVF3 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3IA0A087WXS9 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3EA0A087X179 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3KA0A087X1G2 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3BA6NDS4 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3FA6NER0 549 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 AQP12BA6NM10 295 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3LB9A6J9 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 F8W810 466 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 PES1O00541 588 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 PRYO14603 147 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 DNPH1O43598 174 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 CNOT3O75175 753 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 RPS6KA5O75582 802 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 SLU7O95391 586 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ADCY5O95622 1261 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3HP0C7X1 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TNNT1P13805 278 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 CFHR1Q03591 330 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 HYAL1Q12794 435 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 DHX8Q14562 1220 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 GRM4Q14833 912 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 SEC23BQ15437 767 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 AAK1Q2M2I8 961 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ANXA2RQ3ZCQ2 193 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 AP1ARQ63HQ0 302 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3GQ6DHY5 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3CQ6IPX1 549 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 KLHL17Q6TDP4 642 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TMCO3Q6UWJ1 677 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 SLC39A5Q6ZMH5 540 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF793Q6ZN11 406 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 RBM44Q6ZP01 1051 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 FAM57BQ71RH2 274 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 RAB11FIP2Q7L804 512 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ANKRD23Q86SG2 305 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 CCDC117Q8IWD4 279 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ADHFE1Q8IWW8 467 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBC1D3Q8IZP1 549 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 VPS37AQ8NEZ2 397 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 IGFBPL1Q8WX77 278 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 NLRP4Q96MN2 994 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 RMDN3Q96TC7 470 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 RTKNQ9BST9 563 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 HTATIP2Q9BUP3 242 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 UTP14AQ9BVJ6 771 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ELOVL1Q9BW60 279 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 KATNAL1Q9BW62 490 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TMEM120AQ9BXJ8 343 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 BRD8Q9H0E9 1235 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TMX4Q9H1E5 349 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 TTC12Q9H892 705 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 SFXN1Q9H9B4 322 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 LIN7CQ9NUP9 197 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF446Q9NWS9 450 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 LRFN1Q9P244 771 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 UHRF1BP1Q6BDS2 1440 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 PCF11O94913 1555 aaKnown RBP3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 PTPRCP08575 1304 aa3.67□□□□□ -1.82
SDCBPP3-201ENST00000419629 SMARCA4P51532 1647 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 SHROOM2Q13796 1616 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ANKRD30BQ9BXX2 1392 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ABCC2Q92887 1545 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ARHGEF12Q9NZN5 1544 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 hCG_1642624A0A1W2PR95 340 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ANKRD18BA2A2Z9 1011 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 DPPA5A6NC42 116 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 LGALS16A8MUM7 142 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 RPP40O75818 363 aaKnown RBP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 CSTBP04080 98 aaKnown RBP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 CTSAP10619 480 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 KLRK1P26718 216 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ACTN2P35609 894 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 STAT6P42226 847 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 CDK7P50613 346 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF84P51523 738 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 EIF5P55010 431 aaKnown RBP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 RWDD2BP57060 319 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 TAS2R50P59544 299 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 RBM6P78332 1123 aaKnown RBP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 RNASELQ05823 741 aaKnown RBP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 DMWDQ09019 674 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 SF3A3Q12874 501 aaKnown RBP eCLIP3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 TRAF1Q13077 416 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 NEDD9Q14511 834 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 KRT72Q14CN4 511 aa3.66□□□□□ -1.82
SDCBPP3-201ENST00000419629 CCDC38Q502W7 563 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms