RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 MRGPRX1Q96LB2 322 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 SEMA4AQ9H3S1 761 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 LRRC19Q9H756 370 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 ZWILCHQ9H900 591 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 PCDH18Q9HCL0 1135 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 LUC7LQ9NQ29 371 aaKnown RBP19.1■□□□□ 0.65
PTCD3-204ENST00000418628 PRSS16Q9NQE7 514 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 RCOR3Q9P2K3 495 aaPredicted RBP19.1■□□□□ 0.65
PTCD3-204ENST00000418628 DNAI1Q9UI46 699 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 SALL4Q9UJQ4 1053 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 TTC34A8MYJ7 566 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 CD160O95971 181 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 SRCP12931 536 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 GLDCP23378 1020 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 ACVRL1P37023 503 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 NUMBP49757 651 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 VAV2P52735 878 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 PPP6R3Q5H9R7 873 aaPredicted RBP19.09■□□□□ 0.65
PTCD3-204ENST00000418628 SUMF1Q8NBK3 374 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 OR2T3Q8NH03 318 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 ATRIPQ8WXE1 791 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 PTPRN2Q92932 1015 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 TPSD1Q9BZJ3 242 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 FRYLO94915 3013 aa19.09■□□□□ 0.65
PTCD3-204ENST00000418628 EDDM13A0A1B0GTR0 161 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 TARSL2A2RTX5 802 aaKnown RBP19.08■□□□□ 0.64
PTCD3-204ENST00000418628 DCLK1O15075 740 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 RAMP2O60895 175 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 MT-CO1P00395 513 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 ERCC2P18074 760 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 IL4RP24394 825 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 P2RY2P41231 377 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 CLCN6P51797 869 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 YBEYP58557 167 aaPredicted RBP19.08■□□□□ 0.64
PTCD3-204ENST00000418628 ST8SIA6P61647 398 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 KRT83P78385 493 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 MESDQ14696 234 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 HADHQ16836 314 aaKnown RBP19.08■□□□□ 0.64
PTCD3-204ENST00000418628 MAP7D1Q3KQU3 841 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 C9orf64Q5T6V5 341 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 ARHGAP12Q8IWW6 846 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 NPWQ8N729 165 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 HSPH1Q92598 858 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 FAF2Q96CS3 445 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 CSPG4P5Q96PW8 444 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 LACRTQ9GZZ8 138 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 SLC6A17Q9H1V8 727 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 RSPH9Q9H1X1 276 aaPredicted RBP19.08■□□□□ 0.64
PTCD3-204ENST00000418628 MTG2Q9H4K7 406 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 ATP13A1Q9HD20 1204 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 SUN2Q9UH99 717 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 SLC25A13Q9UJS0 675 aa19.08■□□□□ 0.64
PTCD3-204ENST00000418628 TRPM6Q9BX84 2022 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 H3BRJ5 948 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 BUB1BO60566 1050 aaPredicted RBP19.07■□□□□ 0.64
PTCD3-204ENST00000418628 SIN3BO75182 1162 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 ZNF821O75541 412 aaPredicted RBP19.07■□□□□ 0.64
PTCD3-204ENST00000418628 IGLV3-19P01714 112 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 SLC1A1P43005 524 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 SERPINH1P50454 418 aaKnown RBP19.07■□□□□ 0.64
PTCD3-204ENST00000418628 NDST2P52849 883 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 SRSF5Q13243 272 aaKnown RBP19.07■□□□□ 0.64
PTCD3-204ENST00000418628 DPYSL3Q14195 570 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 PARP15Q460N3 678 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 ATP13A4Q4VNC1 1196 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 LRRC38Q5VT99 294 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 C11orf63Q6NUN7 778 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 DONSONQ9NYP3 566 aa19.07■□□□□ 0.64
PTCD3-204ENST00000418628 USP36Q9P275 1121 aaKnown RBP19.07■□□□□ 0.64
PTCD3-204ENST00000418628 RASA4BC9J798 803 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 RASA4O43374 803 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 SYNCRIPO60506 623 aaKnown RBP19.06■□□□□ 0.64
PTCD3-204ENST00000418628 RPP40O75818 363 aaKnown RBP19.06■□□□□ 0.64
PTCD3-204ENST00000418628 IPO7O95373 1038 aaKnown RBP19.06■□□□□ 0.64
PTCD3-204ENST00000418628 KRT7P08729 469 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 CD48P09326 243 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 VAV1P15498 845 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 PLA2G5P39877 138 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 ARL4AP40617 200 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 SERINC3Q13530 473 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 POLD3Q15054 466 aaPredicted RBP19.06■□□□□ 0.64
PTCD3-204ENST00000418628 VSIG1Q86XK7 387 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 TMPRSS6Q8IU80 811 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 CCDC112Q8NEF3 446 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 TPCN2Q8NHX9 752 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 HMCESQ96FZ2 354 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 ZC3H10Q96K80 434 aaKnown RBP19.06■□□□□ 0.64
PTCD3-204ENST00000418628 CALR3Q96L12 384 aaKnown RBP19.06■□□□□ 0.64
PTCD3-204ENST00000418628 ZNF670Q9BS34 389 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 PRDM16Q9HAZ2 1276 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 PDFQ9HBH1 243 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 CD93Q9NPY3 652 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 ETNK2Q9NVF9 386 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 ADAMTS9Q9P2N4 1935 aa19.06■□□□□ 0.64
PTCD3-204ENST00000418628 C3orf70A6NLC5 250 aaPredicted RBP19.05■□□□□ 0.64
PTCD3-204ENST00000418628 TMEM110-MUSTN1A8MSY1 372 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 ZNF487B1APH4 448 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 K7ERQ8 282 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 CBX4O00257 560 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 SMAD6O43541 496 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms