RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CMTM5Q96DZ9 223 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 CDRT15Q96T59 188 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 GORASP1Q9BQQ3 440 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 CDH19Q9H159 772 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 RUVBL2Q9Y230 463 aaKnown RBP12.13□□□□□ -0.47
LIMK1-202ENST00000418310 XPO1O14980 1071 aaKnown RBP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 PMPCBO75439 489 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 VAPBO95292 243 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 YBX3P16989 372 aaKnown RBP eCLIP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 ACADSBP45954 432 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 GRIA4P48058 902 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 KYAT1Q16773 422 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 ARL13AQ5H913 290 aaPredicted RBP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 ZSCAN18Q8TBC5 510 aaPredicted RBP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 SLC10A4Q96EP9 437 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 PAAF1Q9BRP4 392 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 DUSP16Q9BY84 665 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 ACE2Q9BYF1 805 aaPredicted RBP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 TKTL2Q9H0I9 626 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 SUDS3Q9H7L9 328 aaPredicted RBP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 ZCWPW2A0A1B0GU75 182 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 A0A1B0GVG6 124 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 HACD1B0YJ81 288 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 CCL22O00626 93 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 CLGNO14967 610 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 BUD23O43709 281 aaKnown RBP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 GPR32O75388 356 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 FYNP06241 537 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 FAM200BP0CF97 657 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 DARSP14868 501 aaKnown RBP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 GRK2P25098 689 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 LIMK2P53671 638 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 C4orf22Q6V702 233 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 FASTKD5Q7L8L6 764 aaKnown RBP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 TTC16Q8NEE8 873 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 HSFY1Q96LI6 401 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 NPY6RQ99463 290 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 GTSE1Q9NYZ3 720 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 PCDHGB4Q9UN71 923 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 ARHGAP26Q9UNA1 814 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 IPPQ9Y573 584 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 PCDHGB5Q9Y5G0 923 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 G3V2L1 256 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 PIRO00625 290 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 ZNF195O14628 629 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 TRIM13O60858 407 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 OR6B1O95007 311 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 MYL3P08590 195 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 HNRNPLP14866 589 aaKnown RBP eCLIP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 MED21Q13503 144 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 ZNF792Q3KQV3 632 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 LSM12Q3MHD2 195 aaKnown RBP12.12□□□□□ -0.47
LIMK1-202ENST00000418310 GRTP1Q5TC63 336 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 FAM91A1Q658Y4 838 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 CRYBG2Q8N1P7 616 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 ACMSDQ8TDX5 336 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 TSNARE1Q96NA8 513 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 NDNQ99608 321 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 SLC2A6Q9UGQ3 507 aa12.12□□□□□ -0.47
LIMK1-202ENST00000418310 DAB1O75553 588 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 MLNP12872 115 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 ATP6V1B1P15313 513 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 HDCP19113 662 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 PIK3R1P27986 724 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 MSLNQ13421 630 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-202ENST00000418310 SNX17Q15036 470 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 SPANXN3Q5MJ09 141 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 LAYNQ6UX15 382 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 NT5DC4Q86YG4 428 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 RAB3IL1Q8TBN0 382 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 PIP4K2CQ8TBX8 421 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 EXT2Q93063 718 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 NPAS2Q99743 824 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 COPS7BQ9H9Q2 264 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-202ENST00000418310 CRTAC1Q9NQ79 661 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 CHST12Q9NRB3 414 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 XPR1Q9UBH6 696 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 OR12D3Q9UGF7 316 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 ZDHHC2Q9UIJ5 367 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 DCLK1O15075 740 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 FKBP6O75344 327 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 LRIG2O94898 1065 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 AP2A1O95782 977 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 STAU1O95793 577 aaKnown RBP12.11□□□□□ -0.47
LIMK1-202ENST00000418310 NELFEP18615 380 aaKnown RBP12.11□□□□□ -0.47
LIMK1-202ENST00000418310 XRCC1P18887 633 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-202ENST00000418310 SOX11P35716 441 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 CHRNA4P43681 627 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 GLUD2P49448 558 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 THOP1P52888 689 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 PPIL2Q13356 520 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 TBCCQ15814 346 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 SV2CQ496J9 727 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 ZNF410Q86VK4 478 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 PCED1BQ96HM7 432 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 GAD1Q99259 594 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms