RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 VPS28Q9UK41 221 aa7.19□□□□□ -1.26
COPS3-202ENST00000417352 INTS6Q9UL03 887 aaKnown RBP7.19□□□□□ -1.26
COPS3-202ENST00000417352 VANGL2Q9ULK5 521 aa7.19□□□□□ -1.26
COPS3-202ENST00000417352 ITIH6Q6UXX5 1313 aa7.19□□□□□ -1.26
COPS3-202ENST00000417352 TP53BP1Q12888 1972 aaPredicted RBP7.19□□□□□ -1.26
COPS3-202ENST00000417352 KNL1Q8NG31 2342 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 GOLGA4Q13439 2230 aaKnown RBP7.18□□□□□ -1.26
COPS3-202ENST00000417352 FAM181BA6NEQ2 426 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 M0QYT0 321 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 TLR4O00206 839 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 VILLO15195 856 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 SRGAP2O75044 1071 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 SDC3O75056 442 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 C5AR1P21730 350 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 BMP6P22004 513 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 MZF1P28698 734 aaPredicted RBP7.18□□□□□ -1.26
COPS3-202ENST00000417352 HNF1BP35680 557 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 CLDN6P56747 220 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 MCCD1P59942 119 aaPredicted RBP7.18□□□□□ -1.26
COPS3-202ENST00000417352 PITX1P78337 314 aaPredicted RBP7.18□□□□□ -1.26
COPS3-202ENST00000417352 SEMG2Q02383 582 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 SULT2A1Q06520 285 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 PDCLQ13371 301 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 RAPGEF1Q13905 1077 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 MORC3Q14149 939 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 HS1BP3Q53T59 392 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 TRIM65Q6PJ69 517 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 KIAA0907Q7Z7F0 614 aaPredicted RBP7.18□□□□□ -1.26
COPS3-202ENST00000417352 GLRX5Q86SX6 157 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 TRIM59Q8IWR1 403 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 AADATQ8N5Z0 425 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 ATP11CQ8NB49 1132 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 LMO3Q8TAP4 145 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 SPATA20Q8TB22 786 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 PRR7Q8TB68 274 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 OR8D1Q8WZ84 308 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 KLK6Q92876 244 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 MRGPRX3Q96LB0 322 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 FAM129BQ96TA1 746 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 DYRK4Q9NR20 520 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 CYTH4Q9UIA0 394 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 PCDHGB2Q9Y5G2 931 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 ADAMTS20P59510 1910 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 PLXNB3Q9ULL4 1909 aa7.18□□□□□ -1.26
COPS3-202ENST00000417352 DSPP15924 2871 aaKnown RBP7.18□□□□□ -1.26
COPS3-202ENST00000417352 FAM221BA6H8Z2 402 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 C1QTNF3-AMACRE9PGA6 284 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 KPNA3O00505 521 aaPredicted RBP7.17□□□□□ -1.26
COPS3-202ENST00000417352 ENC1O14682 589 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 WNT9AO14904 365 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 PMM2O15305 246 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 SLC31A1O15431 190 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 PCDHGA12O60330 932 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 HSF2BPO75031 334 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 PCDH8O95206 1070 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 WNT1P04628 370 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 CTSKP43235 329 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 RECQLP46063 649 aaPredicted RBP7.17□□□□□ -1.26
COPS3-202ENST00000417352 SULT1E1P49888 294 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 METAP1P53582 386 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 ADPRHP54922 357 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 OXCT1P55809 520 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 PPP2CBP62714 309 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 PPP2CAP67775 309 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 BNIP3Q12983 259 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 NNTQ13423 1086 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 AUHQ13825 339 aaKnown RBP7.17□□□□□ -1.26
COPS3-202ENST00000417352 KCNJ12Q14500 433 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 ELAVL3Q14576 367 aaKnown RBP7.17□□□□□ -1.26
COPS3-202ENST00000417352 DLG2Q15700 870 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 EXOC3L4Q17RC7 722 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 C6orf118Q5T5N4 469 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 FAM46CQ5VWP2 391 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 FBXL22Q6P050 247 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 LRRC31Q6UY01 552 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 C11orf57Q6ZUT1 292 aaPredicted RBP7.17□□□□□ -1.26
COPS3-202ENST00000417352 FAM183BPQ6ZVS7 135 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 Q6ZVU0 165 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 ENOSF1Q7L5Y1 443 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 TMPRSS7Q7RTY8 843 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 TMEM110Q86TL2 294 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 PDZD3Q86UT5 571 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 RYBPQ8N488 228 aaPredicted RBP7.17□□□□□ -1.26
COPS3-202ENST00000417352 C1orf131Q8NDD1 294 aaKnown RBP7.17□□□□□ -1.26
COPS3-202ENST00000417352 STK32AQ8WU08 396 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 PTPRN2Q92932 1015 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 MYO19Q96H55 970 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 SLC39A13Q96H72 371 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 FAM81BQ96LP2 452 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 SPAG5Q96R06 1193 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 CPXM1Q96SM3 734 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 ELF4Q99607 663 aaPredicted RBP7.17□□□□□ -1.26
COPS3-202ENST00000417352 FEM1AQ9BSK4 669 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 SPON2Q9BUD6 331 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 WDCPQ9H6R7 721 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 EBF2Q9HAK2 575 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 APEX2Q9UBZ4 518 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 DNAJC12Q9UKB3 198 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 FZD4Q9ULV1 537 aa7.17□□□□□ -1.26
COPS3-202ENST00000417352 CA5BQ9Y2D0 317 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms