RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CPA5Q8WXQ8 436 aa26■■□□□ 1.75
VEGFA-208ENST00000417285 PCMTD1Q96MG8 357 aaPredicted RBP26■■□□□ 1.75
VEGFA-208ENST00000417285 HAPLN3Q96S86 360 aa26■■□□□ 1.75
VEGFA-208ENST00000417285 NLRC4Q9NPP4 1024 aa26■■□□□ 1.75
VEGFA-208ENST00000417285 LIMA1Q9UHB6 759 aaKnown RBP26■■□□□ 1.75
VEGFA-208ENST00000417285 TMEM59LQ9UK28 342 aa26■■□□□ 1.75
VEGFA-208ENST00000417285 PPM1HQ9ULR3 514 aa26■■□□□ 1.75
VEGFA-208ENST00000417285 RHOCP08134 193 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 ZNF18P17022 549 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 TFE3P19532 575 aaPredicted RBP25.99■■□□□ 1.75
VEGFA-208ENST00000417285 CDK11BP21127 795 aaKnown RBP25.99■■□□□ 1.75
VEGFA-208ENST00000417285 SOX5P35711 763 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 JAM2P57087 298 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 NOMO3P69849 1222 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 SLC45A4Q5BKX6 768 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 C6orf118Q5T5N4 469 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 NAA35Q5VZE5 725 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 ZNF683Q8IZ20 524 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 SH2D3CQ8N5H7 860 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 FAM131CQ96AQ9 280 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 ZMIZ1Q9ULJ6 1067 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 HS3ST2Q9Y278 367 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 SIK3Q9Y2K2 1263 aa25.99■■□□□ 1.75
VEGFA-208ENST00000417285 IGLV3-10A0A075B6K4 115 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 LGALS16A8MUM7 142 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 C1QTNF3-AMACRE9PGA6 284 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 H0Y8X5 98 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 GOLGA8SH3BPF8 625 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 KCNK3O14649 394 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 CNTN5O94779 1100 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 CD38P28907 300 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 DRD3P35462 400 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 GGCXP38435 758 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 STAT1P42224 750 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 GRK6P43250 576 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 NUMBP49757 651 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 CDR2Q01850 454 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 CCDC15Q0P6D6 951 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 SYCP1Q15431 976 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 INAVAQ3KP66 663 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 KCNT1Q5JUK3 1230 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 PRPF39Q86UA1 669 aaKnown RBP25.98■■□□□ 1.75
VEGFA-208ENST00000417285 NEK11Q8NG66 645 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 SLC20A1Q8WUM9 679 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 CCDC114Q96M63 670 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 SLC6A18Q96N87 628 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 EBF2Q9HAK2 575 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 ANLNQ9NQW6 1124 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 AASDHPPTQ9NRN7 309 aa25.98■■□□□ 1.75
VEGFA-208ENST00000417285 NOCTQ9UK39 431 aaKnown RBP25.98■■□□□ 1.75
VEGFA-208ENST00000417285 FAM170AA1A519 330 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 EPHB6O15197 1021 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 LATO43561 262 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 FLT3P36888 993 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 ALFQ53S48 1182 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 C2CD6Q53TS8 623 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 LAYNQ6UX15 382 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 ZNF783Q6ZMS7 281 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 BNIPLQ7Z465 357 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 SLCO6A1Q86UG4 719 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 PNPLA1Q8N8W4 532 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 ATP11CQ8NB49 1132 aa25.97■■□□□ 1.75
VEGFA-208ENST00000417285 CFAP47Q6ZTR5 3102 aa25.96■■□□□ 1.75
VEGFA-208ENST00000417285 I6L893 689 aaPredicted RBP25.96■■□□□ 1.75
VEGFA-208ENST00000417285 ENDOD1O94919 500 aa25.96■■□□□ 1.75
VEGFA-208ENST00000417285 CLCN6P51797 869 aa25.96■■□□□ 1.75
VEGFA-208ENST00000417285 UBXN1Q04323 297 aa25.96■■□□□ 1.75
VEGFA-208ENST00000417285 TRIM72Q6ZMU5 477 aa25.96■■□□□ 1.75
VEGFA-208ENST00000417285 Q6ZVU0 165 aa25.96■■□□□ 1.75
VEGFA-208ENST00000417285 SERAC1Q96JX3 654 aa25.96■■□□□ 1.75
VEGFA-208ENST00000417285 NAT10Q9H0A0 1025 aaKnown RBP25.96■■□□□ 1.75
VEGFA-208ENST00000417285 SARDHQ9UL12 918 aa25.96■■□□□ 1.75
VEGFA-208ENST00000417285 DMXL2Q8TDJ6 3036 aa25.96■■□□□ 1.75
VEGFA-208ENST00000417285 A0A1B0GTQ1 180 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 ILVBLA1L0T0 632 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 LRRC10BA6NIK2 292 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 E9PAM4 449 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 TNFSF14O43557 240 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 PLRG1O43660 514 aaKnown RBP25.95■■□□□ 1.74
VEGFA-208ENST00000417285 SRGAP2O75044 1071 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 CYP1A1P04798 512 aaPredicted RBP25.95■■□□□ 1.74
VEGFA-208ENST00000417285 SRCP12931 536 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 MMP8P22894 467 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 OR1E1P30953 314 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 FMO1Q01740 532 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 TYRO3Q06418 890 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 SLC20A2Q08357 652 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 DCAF4L2Q8NA75 395 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 TMIEQ8NEW7 156 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 PIP4K2CQ8TBX8 421 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 CFAP57Q96MR6 1250 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 PSMB7Q99436 277 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 ELF4Q99607 663 aaPredicted RBP25.95■■□□□ 1.74
VEGFA-208ENST00000417285 RETREG1Q9H6L5 497 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 MPP6Q9NZW5 540 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 VPS51Q9UID3 782 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 DMTF1Q9Y222 760 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 SNX10Q9Y5X0 201 aa25.95■■□□□ 1.74
VEGFA-208ENST00000417285 A0A1W2PR77 199 aa25.94■■□□□ 1.74
VEGFA-208ENST00000417285 TLR4O00206 839 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms