RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 SCNM1Q9BWG6 230 aa18.34■□□□□ 0.53
CPNE1-210ENST00000416778 MUC3BQ9H195 1237 aa18.34■□□□□ 0.53
CPNE1-210ENST00000416778 SLC25A13Q9UJS0 675 aa18.34■□□□□ 0.53
CPNE1-210ENST00000416778 HS3ST2Q9Y278 367 aa18.34■□□□□ 0.53
CPNE1-210ENST00000416778 CACNA1BQ00975 2339 aa18.33■□□□□ 0.53
CPNE1-210ENST00000416778 CABIN1Q9Y6J0 2220 aa18.33■□□□□ 0.53
CPNE1-210ENST00000416778 K7ERQ8 282 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 WNT9AO14904 365 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 SNAP91O60641 907 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 RHOCP08134 193 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 SRCP12931 536 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 ADRA1BP35368 520 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 CTSKP43235 329 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 ATP11AP98196 1134 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 CCDC183Q5T5S1 534 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 LRSAM1Q6UWE0 723 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 TRIM72Q6ZMU5 477 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 FAM131BQ86XD5 332 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 ANKRD20A12PQ8NF67 263 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 NEK11Q8NG66 645 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 JOSD2Q8TAC2 188 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 OR8D1Q8WZ84 308 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 CENPIQ92674 756 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-210ENST00000416778 METTL5Q9NRN9 209 aaKnown RBP18.33■□□□□ 0.52
CPNE1-210ENST00000416778 PCOLCE2Q9UKZ9 415 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 PCDHB9Q9Y5E1 797 aa18.33■□□□□ 0.52
CPNE1-210ENST00000416778 AKAP13Q12802 2813 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TBC1D3DA0A087WVF3 549 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TBC1D3IA0A087WXS9 549 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TBC1D3EA0A087X179 549 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TBC1D3KA0A087X1G2 549 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 ILVBLA1L0T0 632 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 FAM221BA6H8Z2 402 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TBC1D3FA6NER0 549 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 C2CD4BA6NLJ0 364 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TBC1D3LB9A6J9 549 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 PLK4O00444 970 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 VILLO15195 856 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 ALOX15BO15296 676 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 SMAD6O43541 496 aaKnown RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 HYAL3O43820 417 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TRIM16O95361 564 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 MBD3O95983 291 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 WNT1P04628 370 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TBC1D3HP0C7X1 549 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 OR1E1P30953 314 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 ADPRHP54922 357 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 ST3GAL2Q16842 350 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 ZNF423Q2M1K9 1284 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 C15orf59Q2T9L4 293 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 FAM46CQ5VWP2 391 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TBC1D3GQ6DHY5 549 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TBC1D3CQ6IPX1 549 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 LAYNQ6UX15 382 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 Q6ZVU0 165 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TFAP2DQ7Z6R9 452 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 DSG4Q86SJ6 1040 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 GLRX5Q86SX6 157 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 PHF13Q86YI8 300 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TBC1D3Q8IZP1 549 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 SETD7Q8WTS6 366 aaKnown RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 PCMTD1Q96MG8 357 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 C11orf70Q9BRQ4 267 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 C2orf49Q9BVC5 232 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 TMEM121BQ9BXQ6 578 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 MAGEB5Q9BZ81 275 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 KDM4CQ9H3R0 1056 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 ARHGAP20Q9P2F6 1191 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 PPARGC1AQ9UBK2 798 aaKnown RBP18.32■□□□□ 0.52
CPNE1-210ENST00000416778 VPS51Q9UID3 782 aa18.32■□□□□ 0.52
CPNE1-210ENST00000416778 USP24Q9UPU5 2620 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 A0A1W2PR77 199 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 C1QTNF9BB2RNN3 333 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 H0Y8X5 98 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 LATO43561 262 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 RTN2O75298 545 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 ZMPSTE24O75844 475 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 KRT37O76014 449 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 GJB6O95452 261 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 PROS1P07225 676 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 C1QTNF9P0C862 333 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 ATP1A3P13637 1013 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 RFC1P35251 1148 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-210ENST00000416778 PTPN9P43378 593 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 TYRO3Q06418 890 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 SUZ12Q15022 739 aaKnown RBP18.31■□□□□ 0.52
CPNE1-210ENST00000416778 CLEC16AQ2KHT3 1053 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 C6orf118Q5T5N4 469 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 SLCO6A1Q86UG4 719 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 CHCHD4Q8N4Q1 142 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 ATP11CQ8NB49 1132 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 OR7D4Q8NG98 312 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 OR2A12Q8NGT7 310 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 PIP4K2CQ8TBX8 421 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 SLC6A18Q96N87 628 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 AGPAT1Q99943 283 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 ZYG11BQ9C0D3 744 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 OSBPL2Q9H1P3 480 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 ADAM22Q9P0K1 906 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 TMEM63CQ9P1W3 806 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms