RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 MS4A13Q5J8X5 152 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 EFHC1Q5JVL4 640 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D3GQ6DHY5 549 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D3CQ6IPX1 549 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 TMEM110Q86TL2 294 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 PASD1Q8IV76 773 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D3Q8IZP1 549 aaPredicted RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 APCDD1Q8J025 514 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 DCBLD1Q8N8Z6 715 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 MFSD2AQ8NA29 543 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 PTPRN2Q92932 1015 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 AZIN2Q96A70 460 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 NAF1Q96HR8 494 aaKnown RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 FCRL2Q96LA5 508 aaPredicted RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 LGMNQ99538 433 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 POPDC2Q9HBU9 364 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 FANCLQ9NW38 375 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 ARHGAP20Q9P2F6 1191 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 NAALADL1Q9UQQ1 740 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 PCDHB1Q9Y5F3 818 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 E5RJQ4 531 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 TRIM38O00635 465 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 SIGLEC6O43699 453 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 MOCS2O96007 188 aaPredicted RBP13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 VAV1P15498 845 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 RPL34P49207 117 aaKnown RBP13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 ECT2LQ008S8 904 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 KCNMA1Q12791 1236 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 PDCLQ13371 301 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 DCAF6Q58WW2 860 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 MIIPQ5JXC2 388 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 RNF219Q5W0B1 726 aaPredicted RBP13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 RBM43Q6ZSC3 357 aaKnown RBP13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 SLC47A2Q86VL8 602 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 CACTIN-AS1Q8N1I8 211 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 RNF34Q969K3 372 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 STK33Q9BYT3 514 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 SIX2Q9NPC8 291 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 XPO7Q9UIA9 1087 aaKnown RBP13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 TPX2Q9ULW0 747 aaKnown RBP13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 PCDHGC3Q9UN70 934 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 CA5BQ9Y2D0 317 aa13.62□□□□□ -0.23
CTHRC1-202ENST00000415886 CYSRT1A8MQ03 144 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 J3QKU1 62 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 ERVH48-1M5A8F1 160 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 RTN2O75298 545 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 MOCS3O95396 460 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 MT-CO3P00414 261 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 APOEP02649 317 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 UCHL3P15374 230 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 CDK17Q00537 523 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 MYL5Q02045 173 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 ELAVL3Q14576 367 aaKnown RBP13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 TAF1BQ53T94 588 aaPredicted RBP13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 OR6B2Q6IFH4 312 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 BEND5Q7L4P6 421 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 PRPF39Q86UA1 669 aaKnown RBP13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 FAM71AQ8IYT1 594 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 LGI2Q8N0V4 545 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 TMEM35BQ8NCS4 154 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 DQX1Q8TE96 717 aaKnown RBP13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 CYTH4Q9UIA0 394 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 TLR6Q9Y2C9 796 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 SETXQ7Z333 2677 aaKnown RBP13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 PTPRQQ9UMZ3 2332 aa13.61□□□□□ -0.23
CTHRC1-202ENST00000415886 PLRG1O43660 514 aaKnown RBP13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 MPOP05164 745 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 FYNP06241 537 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 GLI1P08151 1106 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 SLC2A3P11169 496 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 CLCN1P35523 988 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 DAB2P98082 770 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 KRT31Q15323 416 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 POM121L1PQ3SYA9 428 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 SYPL2Q5VXT5 272 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 RAP1GAP2Q684P5 730 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 C11orf57Q6ZUT1 292 aaPredicted RBP13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 IQCHQ86VS3 1027 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 SLC25A45Q8N413 288 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 WDTC1Q8N5D0 677 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 MSANTD4Q8NCY6 345 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 ZNF248Q8NDW4 579 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 FAM131CQ96AQ9 280 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 SLC39A13Q96H72 371 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 SPAG5Q96R06 1193 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 CAAP1Q9H8G2 361 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 CPNE5Q9HCH3 593 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 TJP2Q9UDY2 1190 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 SARDHQ9UL12 918 aa13.6□□□□□ -0.23
CTHRC1-202ENST00000415886 KNTC1P50748 2209 aa13.59□□□□□ -0.23
CTHRC1-202ENST00000415886 HELZ2Q9BYK8 2649 aaKnown RBP13.59□□□□□ -0.23
CTHRC1-202ENST00000415886 SYNJ2BP-COX16A0A087WUM0 186 aa13.59□□□□□ -0.23
CTHRC1-202ENST00000415886 SMTNL1A8MU46 457 aa13.59□□□□□ -0.23
CTHRC1-202ENST00000415886 FFAR2O15552 330 aa13.59□□□□□ -0.23
CTHRC1-202ENST00000415886 MAGEC1O60732 1142 aa13.59□□□□□ -0.23
CTHRC1-202ENST00000415886 TRUB2O95900 331 aaKnown RBP13.59□□□□□ -0.23
CTHRC1-202ENST00000415886 PNMA6AP0CW24 399 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms