RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 CLCN6P51797 869 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 GEMIN4P57678 1058 aaKnown RBP16.86■□□□□ 0.29
LINC00398-201ENST00000414407 CAMK2GQ13555 558 aaPredicted RBP16.86■□□□□ 0.29
LINC00398-201ENST00000414407 DPYSL3Q14195 570 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 HNRNPA1L2Q32P51 320 aaKnown RBP16.86■□□□□ 0.29
LINC00398-201ENST00000414407 AFMIDQ63HM1 303 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 IL31Q6EBC2 164 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 LRRC57Q8N9N7 239 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 KIAA1524Q8TCG1 905 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 FAF2Q96CS3 445 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 SPON2Q9BUD6 331 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 KLC2Q9H0B6 622 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 PRDM16Q9HAZ2 1276 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 ZSCAN32Q9NX65 697 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 SLCO3A1Q9UIG8 710 aa16.86■□□□□ 0.29
LINC00398-201ENST00000414407 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.86■□□□□ 0.29
LINC00398-201ENST00000414407 MUC22E2RYF6 1773 aaPredicted RBP16.86■□□□□ 0.29
LINC00398-201ENST00000414407 TARSL2A2RTX5 802 aaKnown RBP16.85■□□□□ 0.29
LINC00398-201ENST00000414407 RASA4BC9J798 803 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 CBX4O00257 560 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 RASA4O43374 803 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 KDELR3O43731 214 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 SNAP91O60641 907 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 PTMAP06454 111 aaKnown RBP16.85■□□□□ 0.29
LINC00398-201ENST00000414407 CD48P09326 243 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 COL9A1P20849 921 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 SERPINB6P35237 376 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 GJC1P36383 396 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 ACVRL1P37023 503 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 SERINC3Q13530 473 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 ZFYVE27Q5T4F4 411 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 KIAA1211LQ6NV74 962 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 TSSK4Q6SA08 328 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 TMCO3Q6UWJ1 677 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 WDR5BQ86VZ2 330 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 LONP2Q86WA8 852 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 SH2D3CQ8N5H7 860 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 RAPGEF5Q92565 580 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 RPL10LQ96L21 214 aaKnown RBP16.85■□□□□ 0.29
LINC00398-201ENST00000414407 HHIPQ96QV1 700 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 CALN1Q9BXU9 219 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 HYOU1Q9Y4L1 999 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 PCDHGA2Q9Y5H1 932 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 RAD54BQ9Y620 910 aa16.85■□□□□ 0.29
LINC00398-201ENST00000414407 CHD5Q8TDI0 1954 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 EDDM13A0A1B0GTR0 161 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 TCRBV21S2A2A0A5A6 115 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 MACROD2A1Z1Q3 448 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 GRID2IPA4D2P6 1211 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 ARHGAP42A6NI28 874 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 C3orf70A6NLC5 250 aaPredicted RBP16.84■□□□□ 0.29
LINC00398-201ENST00000414407 H0Y858 1186 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 HLA-EP13747 358 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 AMPD1P23109 780 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 STK19P49842 368 aaPredicted RBP16.84■□□□□ 0.29
LINC00398-201ENST00000414407 ARF5P84085 180 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 ODF2Q5BJF6 829 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 ANKRD20A8PQ5CZ79 823 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 METTL3Q86U44 580 aaKnown RBP16.84■□□□□ 0.29
LINC00398-201ENST00000414407 KATNAL2Q8IYT4 538 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 ZBTB44Q8NCP5 570 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 FRS2Q8WU20 508 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 CASKIN2Q8WXE0 1202 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 HMCESQ96FZ2 354 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 CEP44Q9C0F1 390 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 GOLPH3Q9H4A6 298 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 PRSS16Q9NQE7 514 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 TRIM10Q9UDY6 481 aa16.84■□□□□ 0.29
LINC00398-201ENST00000414407 A0A0U1RQJ8 604 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 LRRD1A4D1F6 860 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 TTC34A8MYJ7 566 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 AXIN1O15169 862 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 SRCP12931 536 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 GABRG2P18507 467 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 GLDCP23378 1020 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 CNR2P34972 360 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 CTNNA1P35221 906 aaKnown RBP16.83■□□□□ 0.28
LINC00398-201ENST00000414407 SERPINH1P50454 418 aaKnown RBP16.83■□□□□ 0.28
LINC00398-201ENST00000414407 CCDC173Q0VFZ6 552 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 MMRN1Q13201 1228 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 INO80DQ53TQ3 878 aaPredicted RBP16.83■□□□□ 0.28
LINC00398-201ENST00000414407 C9orf64Q5T6V5 341 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 ANO7Q6IWH7 933 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 ZC3H14Q6PJT7 736 aaKnown RBP16.83■□□□□ 0.28
LINC00398-201ENST00000414407 LRRC49Q8IUZ0 686 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 ARHGAP12Q8IWW6 846 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 NPWQ8N729 165 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 ATP11CQ8NB49 1132 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 MDGA1Q8NFP4 955 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 OR2T3Q8NH03 318 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 PCDH19Q8TAB3 1148 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 ATRIPQ8WXE1 791 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 ISG20Q96AZ6 181 aaKnown RBP16.83■□□□□ 0.28
LINC00398-201ENST00000414407 RNF157Q96PX1 679 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 SLC39A8Q9C0K1 460 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 ETNK2Q9NVF9 386 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 KLHL11Q9NVR0 708 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 PCDHA3Q9Y5H8 950 aa16.83■□□□□ 0.28
LINC00398-201ENST00000414407 CCDC66A2RUB6 948 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms