RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SPTLC1O15269 473 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 LIASO43766 372 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 ERFP50548 548 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 CLCN5P51795 746 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 ENPEPQ07075 957 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 KLC1Q07866 573 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 RASA2Q15283 850 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 GPSM1Q86YR5 675 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 CREG2Q8IUH2 290 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 KIF2BQ8N4N8 673 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 C10orf53Q8N6V4 93 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 PGM2Q96G03 612 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 TBC1D14Q9P2M4 693 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 CD86P42081 329 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 FAM45BPQ6NSW5 357 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 LCLAT1Q6UWP7 414 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 SH3BP5LQ7L8J4 393 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 FAM45AQ8TCE6 357 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 DNAJC9Q8WXX5 260 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 MORF4L1Q9UBU8 362 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 SLC27A5Q9Y2P5 690 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 TDRKHQ9Y2W6 561 aaKnown RBP17.55■□□□□ 0.4
PHRF1-202ENST00000413872 CXCR2P25025 360 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 TARSP26639 723 aaKnown RBP17.55■□□□□ 0.4
PHRF1-202ENST00000413872 BRCC3P46736 316 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 TMED1Q13445 227 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 ATAD3BQ5T9A4 648 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 STAG3L4Q8TBR4 150 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 AHCYL2Q96HN2 611 aaKnown RBP17.55■□□□□ 0.4
PHRF1-202ENST00000413872 PHLPP1O60346 1717 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 PIK3C2AO00443 1686 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 FGBP02675 491 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 GSNP06396 782 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 FMO4P31512 558 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 GUCA1AP43080 201 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-202ENST00000413872 MMRN1Q13201 1228 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 PEX6Q13608 980 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 AGKQ53H12 422 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 PPP1R26Q5T8A7 1209 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-202ENST00000413872 GALNT4Q8N4A0 578 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 PPP1R13LQ8WUF5 828 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ANKZF1Q9H8Y5 726 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 SLC28A3Q9HAS3 691 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 MID1IP1Q9NPA3 183 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 NDUFV1P49821 464 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 DYNC1I2Q13409 638 aaKnown RBP17.54■□□□□ 0.4
PHRF1-202ENST00000413872 SLC25A52Q3SY17 297 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-202ENST00000413872 SLC44A2Q8IWA5 706 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-202ENST00000413872 TCP10LQ8TDR4 215 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 BBS2Q9BXC9 721 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 PRDM12Q9H4Q4 367 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 LRRC19Q9H756 370 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ZNF112Q9UJU3 913 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 AP3M1Q9Y2T2 418 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ANXA5P08758 320 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ALADP13716 330 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 TRPC1P48995 793 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ALLCQ8N6M5 410 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ZNF614Q8N883 585 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 MAGEB10Q96LZ2 347 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ZCWPW1Q9H0M4 648 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 RAD21L1Q9H4I0 556 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ASB8Q9H765 288 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 E9PBE3 544 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 RGS14O43566 566 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 KLHL41O60662 606 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 NDUFS2O75306 463 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ERCC2P18074 760 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 HTR7P34969 479 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 RFX3P48380 749 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 PLOD1Q02809 727 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-202ENST00000413872 INSCQ1MX18 579 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 PLD3Q8IV08 490 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 SCUBE1Q8IWY4 988 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ATXN2LQ8WWM7 1075 aaKnown RBP17.54■□□□□ 0.4
PHRF1-202ENST00000413872 GFM2Q969S9 779 aaKnown RBP17.54■□□□□ 0.4
PHRF1-202ENST00000413872 ARL15Q9NXU5 204 aa17.54■□□□□ 0.4
PHRF1-202ENST00000413872 RCOR3Q9P2K3 495 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-202ENST00000413872 EIF4E1BA6NMX2 242 aaKnown RBP17.53■□□□□ 0.4
PHRF1-202ENST00000413872 TREHO43280 583 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 NFKB1P19838 968 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 ICE2Q659A1 982 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 IRGQQ8WZA9 623 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 ABTB1Q969K4 478 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-202ENST00000413872 KCND1Q9NSA2 647 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 KIAA1522Q9P206 1035 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-202ENST00000413872 SLC45A1Q9Y2W3 748 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 ATRNL1Q5VV63 1379 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 C15orf38-AP3S2A0A0A6YYH1 394 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 SYN3O14994 580 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 USP1O94782 785 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 TNNI3P19429 210 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 GABRR2P28476 465 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 ECM1Q16610 540 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 DDR2Q16832 855 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 STXBP5Q5T5C0 1151 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 DOK6Q6PKX4 331 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 ARPINQ7Z6K5 226 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 CLEC4DQ8WXI8 215 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms