RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NBASA2RRP1 2371 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 RNGTTO60942 597 aaKnown RBP9.84□□□□□ -0.83
RFFL-203ENST00000413582 MOCS2O96007 188 aaPredicted RBP9.84□□□□□ -0.83
RFFL-203ENST00000413582 FYNP06241 537 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 ALPPL2P10696 532 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 VDRP11473 427 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 PRLRP16471 622 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 SYKP43405 635 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 TAS2R38P59533 333 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 SRSF1Q07955 248 aaKnown RBP eCLIP9.84□□□□□ -0.83
RFFL-203ENST00000413582 CUL2Q13617 745 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 ISXQ2M1V0 245 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 FAM46CQ5VWP2 391 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 LCLAT1Q6UWP7 414 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 PRICKLE2Q7Z3G6 844 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 DSG4Q86SJ6 1040 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 TAC4Q86UU9 113 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 CHSY1Q86X52 802 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 LGI2Q8N0V4 545 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 FMR1NBQ8N0W7 255 aaPredicted RBP9.84□□□□□ -0.83
RFFL-203ENST00000413582 SLC22A18ASQ8N1D0 253 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 OR13H1Q8NG92 308 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 SLC35F5Q8WV83 523 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 OR8D1Q8WZ84 308 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 TFAP2BQ92481 460 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 PRR11Q96HE9 360 aaPredicted RBP9.84□□□□□ -0.83
RFFL-203ENST00000413582 MYOCQ99972 504 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 USP29Q9HBJ7 922 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 PPM1HQ9ULR3 514 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 TLR6Q9Y2C9 796 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 FLNCQ14315 2725 aa9.84□□□□□ -0.83
RFFL-203ENST00000413582 PMS2P1A4D2B8 440 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 CDRT15L2A8MXV6 281 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 C1QTNF3-AMACRE9PGA6 284 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 K7ESM1 405 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 ALOX15BO15296 676 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 SLC31A1O15431 190 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 RHOBTB3O94955 611 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 MYL1P05976 194 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 PDGFRAP16234 1089 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 TGM2P21980 687 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 RPL13P26373 211 aaKnown RBP9.83□□□□□ -0.84
RFFL-203ENST00000413582 NNMTP40261 264 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 PLK1P53350 603 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 SULT2A1Q06520 285 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 ADAM9Q13443 819 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 CBWD6Q4V339 395 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 CBWD3Q5JTY5 395 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 CBWD5Q5RIA9 395 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 CCDC183Q5T5S1 534 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 PIP5KL1Q5T9C9 394 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 RAP1GAP2Q684P5 730 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 CXorf57Q6NSI4 855 aaKnown RBP9.83□□□□□ -0.84
RFFL-203ENST00000413582 GCNT7Q6ZNI0 430 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 CIR1Q86X95 450 aaPredicted RBP9.83□□□□□ -0.84
RFFL-203ENST00000413582 GUF1Q8N442 669 aaKnown RBP9.83□□□□□ -0.84
RFFL-203ENST00000413582 IFI44Q8TCB0 444 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 MAPK15Q8TD08 544 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 IFT43Q96FT9 208 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 ATXN7L3BQ96GX2 97 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 SLC46A1Q96NT5 459 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 NOX5Q96PH1 765 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 ZSWIM1Q9BR11 485 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 CALN1Q9BXU9 219 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 TRIM4Q9C037 500 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 OSBPL2Q9H1P3 480 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 FZD3Q9NPG1 666 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 GPR27Q9NS67 375 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 MAPK8IP1Q9UQF2 711 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 PCDHGA8Q9Y5G5 932 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 ENTPD2Q9Y5L3 495 aa9.83□□□□□ -0.84
RFFL-203ENST00000413582 SPTAN1Q13813 2472 aaKnown RBP9.82□□□□□ -0.84
RFFL-203ENST00000413582 A0A1W2PQU0 124 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 M0QYV0 167 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 TERTO14746 1132 aaKnown RBP9.82□□□□□ -0.84
RFFL-203ENST00000413582 MCF2LO15068 1137 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 SCAMP1O15126 338 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 ATP9BO43861 1147 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 STX10O60499 249 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 NEBLO76041 1014 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 FBXO21O94952 628 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 ZNF202O95125 648 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 APOEP02649 317 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 PAEPP09466 180 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 TACR2P21452 398 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 HNRNPA2B1P22626 353 aaKnown RBP9.82□□□□□ -0.84
RFFL-203ENST00000413582 RBMS1P29558 406 aaKnown RBP9.82□□□□□ -0.84
RFFL-203ENST00000413582 AKT2P31751 481 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 DUSP3P51452 185 aaPredicted RBP9.82□□□□□ -0.84
RFFL-203ENST00000413582 PDX1P52945 283 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 CLDN2P57739 230 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 YWHAEP62258 255 aaKnown RBP9.82□□□□□ -0.84
RFFL-203ENST00000413582 NFATC3Q12968 1075 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 CLN3Q13286 438 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 SLC12A1Q13621 1099 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 ZNF284Q2VY69 593 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 EDRF1Q3B7T1 1238 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 GUSBP11Q6P575 273 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 KRBA2Q6ZNG9 492 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 Q6ZVU0 165 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms