RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 NPNTQ6UXI9 565 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 TAOK1Q7L7X3 1001 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 IRGQQ8WZA9 623 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 FAM149B1Q96BN6 582 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 CENPTQ96BT3 561 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 PCED1BQ96HM7 432 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 ZSWIM3Q96MP5 696 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 KCTD15Q96SI1 283 aaPredicted RBP17.59■□□□□ 0.41
PTPRC-206ENST00000413409 SMOQ99835 787 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 POPDC2Q9HBU9 364 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 CSNK1G1Q9HCP0 422 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 PNPLA8Q9NP80 782 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 DNAJC17Q9NVM6 304 aaKnown RBP17.59■□□□□ 0.41
PTPRC-206ENST00000413409 PAK5Q9P286 719 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 FZD10Q9ULW2 581 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 TLDC2A0PJX2 215 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 MYBPHLA2RUH7 354 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 H7C0C1 242 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 TMEM189-UBE2V1I3L0A0 370 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 BEST1O76090 585 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 VIPR2P41587 438 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 CCR2P41597 374 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 ATP5OP48047 213 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 TKTL1P51854 596 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 MAP3K7CLP57077 242 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 GUCY1A3Q02108 690 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 MAPRE1Q15691 268 aaKnown RBP17.58■□□□□ 0.4
PTPRC-206ENST00000413409 FAM171BQ6P995 826 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 PPP1R21Q6ZMI0 780 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 FAM71DQ8N9W8 422 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 ZMIZ2Q8NF64 920 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 UHMK1Q8TAS1 419 aaKnown RBP17.58■□□□□ 0.4
PTPRC-206ENST00000413409 MYLPFQ96A32 169 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 NTAN1Q96AB6 310 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 SUSD3Q96L08 255 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 PWWP2AQ96N64 755 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 ASB16Q96NS5 453 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 QKIQ96PU8 341 aaKnown RBP eCLIP17.58■□□□□ 0.41e-6■■■■■ 33.2
PTPRC-206ENST00000413409 CSPG4P5Q96PW8 444 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 PKMYT1Q99640 499 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 FRMD8Q9BZ67 464 aaPredicted RBP17.58■□□□□ 0.4
PTPRC-206ENST00000413409 ULBP1Q9BZM6 244 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 EPN3Q9H201 632 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 DHX35Q9H5Z1 703 aaKnown RBP17.58■□□□□ 0.4
PTPRC-206ENST00000413409 CALCOCO1Q9P1Z2 691 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 USP3Q9Y6I4 520 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 VWA8A3KMH1 1905 aa17.58■□□□□ 0.4
PTPRC-206ENST00000413409 PTPRDP23468 1912 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 HHLA1C9JL84 531 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 H3BRJ5 948 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 CHADO15335 359 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 CDH16O75309 829 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 B3GAT3O94766 335 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 ZBED1O96006 694 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 PSMC3P17980 439 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 ARL4AP40617 200 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 MAGEA6P43360 314 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 SOX9P48436 509 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 PXNP49023 591 aaPredicted RBP17.57■□□□□ 0.4
PTPRC-206ENST00000413409 SCAPQ12770 1279 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 RASA2Q15283 850 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 C1orf228Q6PIY5 440 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 TDRPQ86YL5 185 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 CCDC185Q8N715 623 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 GAB3Q8WWW8 586 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 PGAP3Q96FM1 320 aaPredicted RBP17.57■□□□□ 0.4
PTPRC-206ENST00000413409 C9orf72Q96LT7 481 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 TRIM62Q9BVG3 475 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 USP29Q9HBJ7 922 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 PCDHB8Q9UN66 801 aa17.57■□□□□ 0.4
PTPRC-206ENST00000413409 BPTFQ12830 3046 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 WDR27A2RRH5 827 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 SMIM23A6NLE4 172 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 C4orf47A7E2U8 309 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 HACD1B0YJ81 288 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 PTPN2P17706 415 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 MPLP40238 635 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 KCNJ11Q14654 390 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 LONRF1Q17RB8 773 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 DCAF6Q58WW2 860 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 SLC45A4Q5BKX6 768 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 PPP6R3Q5H9R7 873 aaPredicted RBP17.56■□□□□ 0.4
PTPRC-206ENST00000413409 TXNDC11Q6PKC3 985 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 BEND5Q7L4P6 421 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 DMAP1Q9NPF5 467 aaPredicted RBP17.56■□□□□ 0.4
PTPRC-206ENST00000413409 EURLQ9NYK6 297 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 FETUBQ9UGM5 382 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 TIMM13Q9Y5L4 95 aaPredicted RBP17.56■□□□□ 0.4
PTPRC-206ENST00000413409 ACTL7BQ9Y614 415 aa17.56■□□□□ 0.4
PTPRC-206ENST00000413409 RPP40O75818 363 aaKnown RBP17.55■□□□□ 0.4
PTPRC-206ENST00000413409 TMEM63AO94886 807 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 SLCO1A2P46721 670 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 ZNF135P52742 658 aaPredicted RBP17.55■□□□□ 0.4
PTPRC-206ENST00000413409 TSPY1Q01534 308 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 LRRC32Q14392 662 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 EFHC2Q5JST6 749 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 ANKRD22Q5VYY1 191 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 BZW1Q7L1Q6 419 aaKnown RBP17.55■□□□□ 0.4
PTPRC-206ENST00000413409 RTL10Q7L3V2 364 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 ZC3H18Q86VM9 953 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms