RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ANKRD52Q8NB46 1076 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 RNF139Q8WU17 664 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 NLRP7Q8WX94 980 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 KIF12Q96FN5 646 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 CPB2Q96IY4 423 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 DNAJC1Q96KC8 554 aaKnown RBP17.95■□□□□ 0.46
SDCBP-202ENST00000413219 MRPL1Q9BYD6 325 aaKnown RBP17.95■□□□□ 0.46
SDCBP-202ENST00000413219 PRDM12Q9H4Q4 367 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 MRPL40Q9NQ50 206 aaKnown RBP17.95■□□□□ 0.46
SDCBP-202ENST00000413219 LMCD1Q9NZU5 365 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 ZSWIM8A7E2V4 1837 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 ERI2A8K979 691 aaKnown RBP17.95■□□□□ 0.46
SDCBP-202ENST00000413219 TRIM38O00635 465 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 NEMP1O14524 444 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 PIGNO95427 931 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 CDK4P11802 303 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 ENO3P13929 434 aaPredicted RBP17.95■□□□□ 0.46
SDCBP-202ENST00000413219 PSMC3P17980 439 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 MATKP42679 507 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 GRIA4P48058 902 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 SLC25A52Q3SY17 297 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 NOL9Q5SY16 702 aaKnown RBP17.95■□□□□ 0.46
SDCBP-202ENST00000413219 PID1Q7Z2X4 250 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 CCNYQ8ND76 341 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 AGR3Q8TD06 166 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 TOP1MTQ969P6 601 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 ATXN7L3BQ96GX2 97 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 SPATA33Q96N06 139 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 TSNARE1Q96NA8 513 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 AGAP2Q99490 1192 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 NSMCE4AQ9NXX6 385 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 UTP6Q9NYH9 597 aaKnown RBP17.95■□□□□ 0.46
SDCBP-202ENST00000413219 EPS15L1Q9UBC2 864 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 DERAQ9Y315 318 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 NME7Q9Y5B8 376 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 A0A087WZ62 844 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 CFLARO15519 480 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 HSPA1AP0DMV8 641 aaKnown RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 HSPA1BP0DMV9 641 aaKnown RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 CYP2C9P11712 490 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 DPP6P42658 865 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 PSMD8P48556 350 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 TXNL4AP83876 142 aaKnown RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 GK3PQ14409 553 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 DLG2Q15700 870 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 SMAD1Q15797 465 aaKnown RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 ANO4Q32M45 955 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 ARL13AQ5H913 290 aaPredicted RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 ZNF484Q5JVG2 852 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 CHERPQ8IWX8 916 aaKnown RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 VPS39Q96JC1 886 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 HSFY1Q96LI6 401 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 FDXACB1Q9BRP7 624 aaPredicted RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 C1QTNF1Q9BXJ1 281 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 CEP41Q9BYV8 373 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 CAB39LQ9H9S4 337 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 MRGBPQ9NV56 204 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 RAD54BQ9Y620 910 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 CEPT1Q9Y6K0 416 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 AK5Q9Y6K8 562 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 TRMUO75648 421 aaKnown RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 ZNF26P17031 533 aaPredicted RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 NPY2RP49146 381 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 DCTN2Q13561 401 aaKnown RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 PPP2R5DQ14738 602 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 KCNMB4Q86W47 210 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 FAM131BQ86XD5 332 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 TMEM151AQ8N4L1 468 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 KLHL32Q96NJ5 620 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 GPR22Q99680 433 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 NUF2Q9BZD4 464 aa17.94■□□□□ 0.46
SDCBP-202ENST00000413219 DDX18Q9NVP1 670 aaKnown RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 CHCHD3Q9NX63 227 aaKnown RBP17.94■□□□□ 0.46
SDCBP-202ENST00000413219 C8BP07358 591 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 COL6A2P12110 1019 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 LCP1P13796 627 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 ZNF23P17027 643 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 CDH2P19022 906 aaPredicted RBP17.93■□□□□ 0.46
SDCBP-202ENST00000413219 YY1P25490 414 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 SLC5A2P31639 672 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 GRM5P41594 1212 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 SAMD7Q7Z3H4 446 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 GALNT4Q8N4A0 578 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 LRRC52Q8N7C0 313 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 LINC01465Q8N7H1 131 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 TRPC4APQ8TEL6 797 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 STYXQ8WUJ0 223 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 USP13Q92995 863 aaPredicted RBP17.93■□□□□ 0.46
SDCBP-202ENST00000413219 PPP1R14BQ96C90 147 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 ASB9Q96DX5 294 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 KLRG1Q96E93 195 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 ZNF597Q96LX8 424 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 DNAI2Q9GZS0 605 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 TASP1Q9H6P5 420 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 HACD3Q9P035 362 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 KLHL8Q9P2G9 620 aaPredicted RBP17.93■□□□□ 0.46
SDCBP-202ENST00000413219 SUCOQ9UBS9 1254 aaKnown RBP17.93■□□□□ 0.46
SDCBP-202ENST00000413219 ZDHHC2Q9UIJ5 367 aa17.93■□□□□ 0.46
SDCBP-202ENST00000413219 TLK1Q9UKI8 766 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms