RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 SLC39A11Q8N1S5 342 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 ALG3Q92685 438 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 E2F7Q96AV8 911 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 HDAC11Q96DB2 347 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 PPP1R16AQ96I34 528 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 FAM167BQ9BTA0 163 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 ZFP14Q9HCL3 533 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 SARS2Q9NP81 518 aaKnown RBP8.69□□□□□ -1.02
SYNE1-211ENST00000413186 MAN1C1Q9NR34 630 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 CHST7Q9NS84 486 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 BAIAP2L1Q9UHR4 511 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.69□□□□□ -1.02
SYNE1-211ENST00000413186 ENDOD1O94919 500 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 ACADMP11310 421 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 CYP2A6P11509 494 aaPredicted RBP8.69□□□□□ -1.02
SYNE1-211ENST00000413186 CCNB1P14635 433 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 HSD17B3P37058 310 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 GABRB2P47870 512 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 CDK7P50613 346 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 DRG2P55039 364 aaKnown RBP8.69□□□□□ -1.02
SYNE1-211ENST00000413186 EIF2B5Q13144 721 aaKnown RBP8.69□□□□□ -1.02
SYNE1-211ENST00000413186 RAB33AQ14088 237 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 LRRC6Q86X45 466 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 RAB42Q8N4Z0 105 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 FBXO25Q8TCJ0 367 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 LZICQ8WZA0 190 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 KLHL29Q96CT2 875 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 CASD1Q96PB1 797 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 HACD3Q9P035 362 aa8.69□□□□□ -1.02
SYNE1-211ENST00000413186 DMGDHQ9UI17 866 aaKnown RBP8.69□□□□□ -1.02
SYNE1-211ENST00000413186 CFAP73A6NFT4 308 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 E9PAM4 449 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 DNAJC6O75061 913 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 GPC4O75487 556 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 CHEK2O96017 543 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 EDN1P05305 212 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 SNRPAP09012 282 aaKnown RBP8.68□□□□□ -1.02
SYNE1-211ENST00000413186 ZRANB3Q5FWF4 1079 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 KIRREL3Q8IZU9 778 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 MREGQ8N565 214 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 AENQ8WTP8 325 aaKnown RBP8.68□□□□□ -1.02
SYNE1-211ENST00000413186 DDX1Q92499 740 aaKnown RBP8.68□□□□□ -1.02
SYNE1-211ENST00000413186 FOPNLQ96NB1 174 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 LPIN3Q9BQK8 851 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 MAGEH1Q9H213 219 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 TBX21Q9UL17 535 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 NCKAP1Q9Y2A7 1128 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 MRPL42Q9Y6G3 142 aaKnown RBP8.68□□□□□ -1.02
SYNE1-211ENST00000413186 CENPFP49454 3210 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 HEATR9A2RTY3 570 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 GRM6O15303 877 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 SOAT2O75908 522 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 GRK2P25098 689 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 SESN3P58005 492 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 MMRN1Q13201 1228 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 DPYSL3Q14195 570 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 GRM3Q14832 879 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 ANKRD20A2Q5SQ80 823 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 ANKRD20A1Q5TYW2 823 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 PTRHD1Q6GMV3 140 aaKnown RBP8.68□□□□□ -1.02
SYNE1-211ENST00000413186 OLFML1Q6UWY5 402 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 TMC5Q6UXY8 1006 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 MCUQ8NE86 351 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 SMOC2Q9H3U7 446 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 FNIP2Q9P278 1114 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 SRRM3A6NNA2 597 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-211ENST00000413186 TAF5Q15542 800 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 TTLL9Q3SXZ7 439 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 UGT3A1Q6NUS8 523 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 RNF19BQ6ZMZ0 732 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 RASGEF1CQ8N431 466 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 PAAF1Q9BRP4 392 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 OSBPL2Q9H1P3 480 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 TASP1Q9H6P5 420 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 NFKBIL1Q9UBC1 381 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-211ENST00000413186 PDE4DIPQ5VU43 2346 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 C1QTNF3-AMACRE9PGA6 284 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 CHADO15335 359 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 FGFR3P22607 806 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 FSHRP23945 695 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 MTHFRP42898 656 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 IRAK1P51617 712 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 GYS2P54840 703 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 DSG1Q02413 1049 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 PDAP1Q13442 181 aaKnown RBP8.68□□□□□ -1.02
SYNE1-211ENST00000413186 NOMO1Q15155 1222 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 RTL10Q7L3V2 364 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 TMCO5AQ8N6Q1 288 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 PRELID2Q8N945 189 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 ATP13A3Q9H7F0 1226 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 RAD18Q9NS91 495 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 CLDND1Q9NY35 253 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 LOXHD1Q8IVV2 1947 aa8.68□□□□□ -1.02
SYNE1-211ENST00000413186 ABLIM1O14639 778 aa8.67□□□□□ -1.02
SYNE1-211ENST00000413186 GABRDO14764 452 aa8.67□□□□□ -1.02
SYNE1-211ENST00000413186 DGKIO75912 1065 aa8.67□□□□□ -1.02
SYNE1-211ENST00000413186 LRIG2O94898 1065 aa8.67□□□□□ -1.02
SYNE1-211ENST00000413186 ATXN8OSP0DMR3 200 aa8.67□□□□□ -1.02
SYNE1-211ENST00000413186 CDKN2BP42772 138 aa8.67□□□□□ -1.02
SYNE1-211ENST00000413186 NRIP1P48552 1158 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms