RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 LMAN1P49257 510 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 TUFMP49411 452 aaKnown RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 CYP2J2P51589 502 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SNRPFP62306 86 aaKnown RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 RBP5P82980 135 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 MYL7Q01449 175 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 CLCQ05315 142 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SMARCB1Q12824 385 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 CUL4BQ13620 913 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 MORC3Q14149 939 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 UBXN2BQ14CS0 331 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 VEPH1Q14D04 833 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 ANGPT1Q15389 498 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 TAF12Q16514 161 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 NFE2Q16621 373 aaPredicted RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 MAP9Q49MG5 647 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 HSP90B2PQ58FF3 399 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 PAPD7Q5XG87 772 aaKnown RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 LMBRD2Q68DH5 695 aaPredicted RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 VITQ6UXI7 678 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 HS2ST1Q7LGA3 356 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 DNAJB7Q7Z6W7 309 aaPredicted RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 TADA2BQ86TJ2 420 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 LRRTM3Q86VH5 581 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 TAX1BP1Q86VP1 789 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 TMC8Q8IU68 726 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 NELFCDQ8IXH7 590 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 GRAMD1CQ8IYS0 662 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 DCP1BQ8IZD4 617 aaKnown RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 PJA1Q8NG27 643 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 OR5B17Q8NGF7 314 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SPATA18Q8TC71 538 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SPPL2BQ8TCT7 592 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 MAGEC3Q8TD91 643 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 GIPC2Q8TF65 315 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 C2orf15Q8WU43 125 aaKnown RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 DEPDC1BQ8WUY9 529 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SCFD1Q8WVM8 642 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 DNASE1L2Q92874 299 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SMARCD2Q92925 531 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 PSMG2Q969U7 264 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 ZSWIM3Q96MP5 696 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SEPT5Q99719 369 aaPredicted RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SH3GL2Q99962 352 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 DDX23Q9BUQ8 820 aaKnown RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 TRMT61BQ9BVS5 477 aaKnown RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 MTMR12Q9C0I1 747 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 ZNF334Q9HCZ1 680 aaPredicted RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SLC39A2Q9NP94 309 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 AGPAT3Q9NRZ7 376 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 FANCLQ9NW38 375 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 GDAP2Q9NXN4 497 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 DONSONQ9NYP3 566 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 HSPBP1Q9NZL4 362 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 ITGA11Q9UKX5 1188 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SIT1Q9Y3P8 196 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SNX9Q9Y5X1 595 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 RALGAPA1Q6GYQ0 2036 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 FAM186AA6NE01 2351 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 PTPRZ1P23471 2315 aaPredicted RBP5.57□□□□□ -1.52
LINC00342-201ENST00000412393 PTPRJQ12913 1337 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 CTAGE9A4FU28 777 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 HEPACAM2A8MVW5 462 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 ZNF263O14978 683 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 KLRC4O43908 158 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 FGF19O95750 216 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 SYF2O95926 243 aaKnown RBP5.57□□□□□ -1.52
LINC00342-201ENST00000412393 DLATP10515 647 aaKnown RBP5.57□□□□□ -1.52
LINC00342-201ENST00000412393 IFNGR1P15260 489 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 PSMC3P17980 439 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 TNNI1P19237 187 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 CD72P21854 359 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 ACAT1P24752 427 aaKnown RBP5.57□□□□□ -1.52
LINC00342-201ENST00000412393 PCSK1P29120 753 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 GDI1P31150 447 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 NBL1P41271 181 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 LHX1P48742 406 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 PPP2CBP62714 309 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 PPP2CAP67775 309 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 SATB1Q01826 763 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 TAGLNQ01995 201 aaKnown RBP5.57□□□□□ -1.52
LINC00342-201ENST00000412393 MYO1EQ12965 1108 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 TRIM14Q14142 442 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 FHL2Q14192 279 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 PSMD6Q15008 389 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 SNRNP35Q16560 246 aaKnown RBP5.57□□□□□ -1.52
LINC00342-201ENST00000412393 KNOP1Q1ED39 458 aaKnown RBP5.57□□□□□ -1.52
LINC00342-201ENST00000412393 BMT2Q1RMZ1 405 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 ARHGAP15Q53QZ3 475 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 STXBP5Q5T5C0 1151 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 GPR158Q5T848 1215 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 PKN3Q6P5Z2 889 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 TPRG1Q6ZUI0 275 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 GAREM2Q75VX8 874 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 DPH6Q7L8W6 267 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 TRAPPC11Q7Z392 1133 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 OSTM1Q86WC4 334 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 WDR49Q8IV35 697 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 CNGA4Q8IV77 575 aa5.57□□□□□ -1.52
LINC00342-201ENST00000412393 ARID3BQ8IVW6 561 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms