RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 NELL1Q92832 810 aa14.28□□□□□ -0.12
CPNE1-206ENST00000412056 HMCESQ96FZ2 354 aa14.28□□□□□ -0.12
CPNE1-206ENST00000412056 CELF6Q96J87 481 aaKnown RBP14.28□□□□□ -0.12
CPNE1-206ENST00000412056 C2orf49Q9BVC5 232 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-206ENST00000412056 ACE2Q9BYF1 805 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-206ENST00000412056 KLC2Q9H0B6 622 aa14.28□□□□□ -0.12
CPNE1-206ENST00000412056 POLMQ9NP87 494 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-206ENST00000412056 ETNK2Q9NVF9 386 aa14.28□□□□□ -0.12
CPNE1-206ENST00000412056 ACTL7AQ9Y615 435 aa14.28□□□□□ -0.12
CPNE1-206ENST00000412056 THADAQ6YHU6 1953 aa14.27□□□□□ -0.12
CPNE1-206ENST00000412056 ANKRD36A6QL64 1941 aa14.27□□□□□ -0.12
CPNE1-206ENST00000412056 LRRD1A4D1F6 860 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 GRID2IPA4D2P6 1211 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 RASA4BC9J798 803 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 DCLK1O15075 740 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 RASA4O43374 803 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 NRDCO43847 1150 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 MT-CO1P00395 513 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 KRT1P04264 644 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 PTMAP06454 111 aaKnown RBP14.27□□□□□ -0.13
CPNE1-206ENST00000412056 GABRG2P18507 467 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 IL4RP24394 825 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 MARCKSL1P49006 195 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 PTPN5P54829 565 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 ARF5P84085 180 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 STARD3Q14849 445 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 PDK2Q15119 407 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 LRRC38Q5VT99 294 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 DAAM2Q86T65 1068 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 RASSF3Q86WH2 238 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 ARHGAP12Q8IWW6 846 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 TP53INP2Q8IXH6 220 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 RHOT1Q8IXI2 618 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 KDM1BQ8NB78 822 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 KCTD6Q8NC69 237 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 CALN1Q9BXU9 219 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 TPSD1Q9BZJ3 242 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 SLC6A17Q9H1V8 727 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 LRRC19Q9H756 370 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 PRSS16Q9NQE7 514 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 FAM86C1Q9NVL1 165 aa14.27□□□□□ -0.13
CPNE1-206ENST00000412056 RCOR3Q9P2K3 495 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-206ENST00000412056 MUC6Q6W4X9 2439 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 CACNA1HO95180 2353 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 NUMA1Q14980 2115 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 K7ERQ8 282 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 AXIN1O15169 862 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 PSTPIP1O43586 416 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 SYNCRIPO60506 623 aaKnown RBP14.26□□□□□ -0.13
CPNE1-206ENST00000412056 SRCP12931 536 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 VAV1P15498 845 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 NDUFV2P19404 249 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 KDELR1P24390 212 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 NNMTP40261 264 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 VASPP50552 380 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-206ENST00000412056 YBEYP58557 167 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-206ENST00000412056 CAMK2GQ13555 558 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-206ENST00000412056 HNRNPA1L2Q32P51 320 aaKnown RBP14.26□□□□□ -0.13
CPNE1-206ENST00000412056 AFMIDQ63HM1 303 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 TMCO3Q6UWJ1 677 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 WDR5BQ86VZ2 330 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 ZNF354CQ86Y25 554 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 SH2D3CQ8N5H7 860 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 LRRC57Q8N9N7 239 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 PCDH19Q8TAB3 1148 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 FRS2Q8WU20 508 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 ZNF670Q9BS34 389 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 FAM126AQ9BYI3 521 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-206ENST00000412056 SLC39A8Q9C0K1 460 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 KCNF1Q9H3M0 494 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 ZSCAN32Q9NX65 697 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 BCCIPQ9P287 314 aaKnown RBP eCLIP14.26□□□□□ -0.135e-7■■■□□ 17.8
CPNE1-206ENST00000412056 HS3ST2Q9Y278 367 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 R4GN57 208 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 ABCA7Q8IZY2 2146 aa14.26□□□□□ -0.13
CPNE1-206ENST00000412056 EDDM13A0A1B0GTR0 161 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 C3orf70A6NLC5 250 aaPredicted RBP14.25□□□□□ -0.13
CPNE1-206ENST00000412056 SMAD6O43541 496 aaKnown RBP14.25□□□□□ -0.13
CPNE1-206ENST00000412056 KDELR3O43731 214 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 ATP9BO43861 1147 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 SIN3BO75182 1162 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 ALDH1A2O94788 518 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 CD160O95971 181 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 CCDC175P0C221 793 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 NDST2P52849 883 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 COPAP53621 1224 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 NRLP54845 237 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 SERINC3Q13530 473 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 DLG2Q15700 870 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 PARP15Q460N3 678 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 ACCSLQ4AC99 568 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 ANKRD20A8PQ5CZ79 823 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 C22orf39Q6P5X5 142 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 LEKR1Q6ZMV7 388 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 Q6ZVU0 165 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 LONP2Q86WA8 852 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 CACUL1Q86Y37 369 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 MAP7D3Q8IWC1 876 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 PGBD3Q8N328 593 aa14.25□□□□□ -0.13
CPNE1-206ENST00000412056 ATP11CQ8NB49 1132 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms