RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 NIPAL4Q0D2K0 466 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 DNAJC3Q13217 504 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 MTA1Q13330 715 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 PIK3R6Q5UE93 754 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 RWDD4Q6NW29 188 aaKnown RBP19.7■□□□□ 0.74
LMO2-203ENST00000411482 TRMT10BQ6PF06 316 aaKnown RBP19.7■□□□□ 0.74
LMO2-203ENST00000411482 MARK2Q7KZI7 788 aaKnown RBP19.7■□□□□ 0.74
LMO2-203ENST00000411482 C14orf80Q86SX3 495 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 TMEM173Q86WV6 379 aaPredicted RBP19.7■□□□□ 0.74
LMO2-203ENST00000411482 UMODL1-AS1Q8N2C9 162 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 CNTD1Q8N815 330 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 KLHL23Q8NBE8 558 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 GDAP1Q8TB36 358 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 FBXO32Q969P5 355 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 GRAMD1AQ96CP6 724 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 SERAC1Q96JX3 654 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 CABS1Q96KC9 395 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 MLXIPLQ9NP71 852 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 SAMD15Q9P1V8 674 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 MTRRQ9UBK8 725 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 NT5C1B-RDH14C9J2C7 533 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 MATN3O15232 486 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 CPB1P15086 417 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 LAG3P18627 525 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 MGAT1P26572 445 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 CCNFP41002 786 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 NPY2RP49146 381 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 TUBP50607 506 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 CAMK1Q14012 370 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 SPOUT1Q5T280 376 aaKnown RBP19.69■□□□□ 0.74
LMO2-203ENST00000411482 SPPL3Q8TCT6 385 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 GDPD5Q8WTR4 605 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 DEPDC1BQ8WUY9 529 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 SLC39A8Q9C0K1 460 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 VPS11Q9H270 941 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 DONSONQ9NYP3 566 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 HSFX1Q9UBD0 423 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 NUDT5Q9UKK9 219 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 GRID1Q9ULK0 1009 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 REV3LO60673 3130 aa19.69■□□□□ 0.74
LMO2-203ENST00000411482 MAGEB16A2A368 324 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 GRM6O15303 877 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 KRT38O76015 456 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 JCHAINP01591 159 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 CSH1P0DML2 217 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 CSH2P0DML3 217 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 ALADP13716 330 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 RHOQP17081 205 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 NFKB1P19838 968 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 DNAJB1P25685 340 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 ETV4P43268 484 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 TAF10Q12962 218 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 GPM6BQ13491 265 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 SPANXN3Q5MJ09 141 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 SNX30Q5VWJ9 437 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 TMEM135Q86UB9 458 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 CTAGE3PQ8IX95 158 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 SLC39A11Q8N1S5 342 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 APOPT1Q96IL0 206 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 CELF6Q96J87 481 aaKnown RBP19.68■□□□□ 0.74
LMO2-203ENST00000411482 BTN2A3PQ96KV6 586 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 ZNF558Q96NG5 402 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 PPP1R2P1Q96PQ5 205 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 FCRL5Q96RD9 977 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 ELAC2Q9BQ52 826 aaKnown RBP19.68■□□□□ 0.74
LMO2-203ENST00000411482 LRRC40Q9H9A6 602 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 ALG13Q9NP73 1137 aaKnown RBP19.68■□□□□ 0.74
LMO2-203ENST00000411482 FGFR1OP2Q9NVK5 253 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 SLC27A5Q9Y2P5 690 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 PCDHB12Q9Y5F1 795 aa19.68■□□□□ 0.74
LMO2-203ENST00000411482 GOLGA6L7A0A1B0GV03 622 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 HMX2A2RU54 273 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 DRGXA6NNA5 263 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 TRIM49D1C9J1S8 452 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 RFPL1O75677 317 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 CCNB1P14635 433 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 POU3F3P20264 500 aaPredicted RBP19.67■□□□□ 0.74
LMO2-203ENST00000411482 NDST2P52849 883 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 SESN2P58004 480 aaPredicted RBP19.67■□□□□ 0.74
LMO2-203ENST00000411482 IFT88Q13099 833 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 CRYMQ14894 314 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 USP41Q3LFD5 358 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 LACTB2Q53H82 288 aaPredicted RBP19.67■□□□□ 0.74
LMO2-203ENST00000411482 TIGD7Q6NT04 549 aaPredicted RBP19.67■□□□□ 0.74
LMO2-203ENST00000411482 TAX1BP1Q86VP1 789 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 ANKS4BQ8N8V4 417 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 ATP6V0D2Q8N8Y2 350 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 TCP10LQ8TDR4 215 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 MYLIPQ8WY64 445 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 AGAP3Q96P47 875 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 TRIM56Q9BRZ2 755 aaKnown RBP19.67■□□□□ 0.74
LMO2-203ENST00000411482 NOL6Q9H6R4 1146 aaKnown RBP19.67■□□□□ 0.74
LMO2-203ENST00000411482 TMEM248Q9NWD8 314 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 SYBUQ9NX95 663 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 BFARQ9NZS9 450 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 PRKAG3Q9UGI9 489 aa19.67■□□□□ 0.74
LMO2-203ENST00000411482 ARHGAP42A6NI28 874 aa19.66■□□□□ 0.74
LMO2-203ENST00000411482 FGF18O76093 207 aa19.66■□□□□ 0.74
LMO2-203ENST00000411482 ALDH7A1P49419 539 aaKnown RBP19.66■□□□□ 0.74
LMO2-203ENST00000411482 KPNA1P52294 538 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms