RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 NRG1Q02297 640 aaPredicted RBP19.54■□□□□ 0.72
SF3A1-202ENST00000411423 GFPT1Q06210 699 aaPredicted RBP19.54■□□□□ 0.72
SF3A1-202ENST00000411423 TTC31Q49AM3 519 aaPredicted RBP19.54■□□□□ 0.72
SF3A1-202ENST00000411423 USP30Q70CQ3 517 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 MINDY1Q8N5J2 469 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 ZYG11BQ9C0D3 744 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 OSBPL2Q9H1P3 480 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 EBF2Q9HAK2 575 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 SGK2Q9HBY8 427 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 OR12D3Q9UGF7 316 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 SLC25A13Q9UJS0 675 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 HS3ST2Q9Y278 367 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 NCOR2Q9Y618 2525 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 SPTBN2O15020 2390 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 A0A1B0GTW7 788 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 GJB3O75712 270 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 RNASEH2AO75792 299 aaKnown RBP19.53■□□□□ 0.72
SF3A1-202ENST00000411423 LRIG2O94898 1065 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 CTSLP07711 333 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 ADRB1P08588 477 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 ACVRL1P37023 503 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 ZNF143P52747 638 aaPredicted RBP19.53■□□□□ 0.72
SF3A1-202ENST00000411423 ZNF252P-AS1Q0IIN9 211 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 GRIK2Q13002 908 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 ELAVL3Q14576 367 aaKnown RBP19.53■□□□□ 0.72
SF3A1-202ENST00000411423 ACCSLQ4AC99 568 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 N4BP2L1Q5TBK1 243 aaPredicted RBP19.53■□□□□ 0.72
SF3A1-202ENST00000411423 SFMBT2Q5VUG0 894 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 PSAPL1Q6NUJ1 521 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 NCEH1Q6PIU2 408 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 LAYNQ6UX15 382 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 DRC7Q8IY82 874 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 HDDC3Q8N4P3 179 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 DCAF4L2Q8NA75 395 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 GANCQ8TET4 914 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 SNX19Q92543 992 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 TRIM7Q9C029 511 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 PCED1AQ9H1Q7 454 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 TMEM51Q9NW97 253 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 ADAMTS1Q9UHI8 967 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 SCML1Q9UN30 329 aa19.53■□□□□ 0.72
SF3A1-202ENST00000411423 PLXNA2O75051 1894 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 ILVBLA1L0T0 632 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 FAM47DPA6NHR8 397 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 BCAT2O15382 392 aaPredicted RBP19.52■□□□□ 0.72
SF3A1-202ENST00000411423 RNASEH1O60930 286 aaKnown RBP19.52■□□□□ 0.72
SF3A1-202ENST00000411423 ZNF821O75541 412 aaPredicted RBP19.52■□□□□ 0.72
SF3A1-202ENST00000411423 FSBPO95073 299 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 CD160O95971 181 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 IL1BP01584 269 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 CCDC172P0C7W6 258 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 NNMTP40261 264 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 ARF5P84085 180 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 MAMLD1Q13495 774 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 POM121L1PQ3SYA9 428 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 FIGNQ5HY92 759 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 C6orf118Q5T5N4 469 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 ACBD5Q5T8D3 534 aaPredicted RBP19.52■□□□□ 0.72
SF3A1-202ENST00000411423 DAB2IPQ5VWQ8 1189 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 KIAA0895LQ68EN5 471 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 RABEPKQ7Z6M1 372 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 ARFGAP1Q8N6T3 406 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 NTAN1Q96AB6 310 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 FAM131CQ96AQ9 280 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 IL21RQ9HBE5 538 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 SUSD2Q9UGT4 822 aa19.52■□□□□ 0.72
SF3A1-202ENST00000411423 ASCC3Q8N3C0 2202 aaKnown RBP19.52■□□□□ 0.71
SF3A1-202ENST00000411423 BNIP3LO60238 219 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 PLEKP08567 350 aaPredicted RBP19.51■□□□□ 0.71
SF3A1-202ENST00000411423 GNSP15586 552 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 C5AR1P21730 350 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 ADPRHP54922 357 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 GNA12Q03113 381 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 SCAPQ12770 1279 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 SEMA3BQ13214 749 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 KCNT1Q5JUK3 1230 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 HGSNATQ68CP4 663 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 PLEKHA7Q6IQ23 1121 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 ATP11CQ8NB49 1132 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 CHST14Q8NCH0 376 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 DEFB124Q8NES8 71 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 OR2A12Q8NGT7 310 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 PPP1R9BQ96SB3 815 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 OMDQ99983 421 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 SPON2Q9BUD6 331 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 C2orf49Q9BVC5 232 aaPredicted RBP19.51■□□□□ 0.71
SF3A1-202ENST00000411423 TNKS2Q9H2K2 1166 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 TM9SF3Q9HD45 589 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 DNAI1Q9UI46 699 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 PPM1HQ9ULR3 514 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 FZD4Q9ULV1 537 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 FZD10Q9ULW2 581 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 NCKAP1Q9Y2A7 1128 aa19.51■□□□□ 0.71
SF3A1-202ENST00000411423 CHD5Q8TDI0 1954 aa19.5■□□□□ 0.71
SF3A1-202ENST00000411423 A0A1B0GVT2 93 aa19.5■□□□□ 0.71
SF3A1-202ENST00000411423 WNT9AO14904 365 aa19.5■□□□□ 0.71
SF3A1-202ENST00000411423 MCF2LO15068 1137 aa19.5■□□□□ 0.71
SF3A1-202ENST00000411423 ADH1BP00325 375 aa19.5■□□□□ 0.71
SF3A1-202ENST00000411423 CD59P13987 128 aa19.5■□□□□ 0.71
SF3A1-202ENST00000411423 GOT1P17174 413 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms