RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 OLFML2AQ68BL7 652 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 DOK6Q6PKX4 331 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 C10orf99Q6UWK7 81 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 TMEM108Q6UXF1 575 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 SHISA6Q6ZSJ9 500 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 OLIG3Q7RTU3 272 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 TBC1D1Q86TI0 1168 aaPredicted RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 PTRH1Q86Y79 214 aaKnown RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 CIARTQ8N365 385 aaPredicted RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ANKRD44Q8N8A2 993 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF615Q8N8J6 731 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 C7orf57Q8NEG2 295 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 MCPH1Q8NEM0 835 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 OR1N1Q8NGS0 311 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 OR2T11Q8NH01 316 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 TDRD7Q8NHU6 1098 aaKnown RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 BICD2Q8TD16 824 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 C10orf105Q8TEF2 133 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 MAML1Q92585 1016 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ERCC4Q92889 916 aaPredicted RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 NUS1Q96E22 293 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 SIPA1Q96FS4 1042 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 CCDC17Q96LX7 622 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF75AQ96N20 296 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 WFIKKN1Q96NZ8 548 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 TRAPPC9Q96Q05 1148 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 SPRR2FQ96RM1 72 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 MAP3K14Q99558 947 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 NPAS1Q99742 590 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 SOX7Q9BT81 388 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 FGFBP2Q9BYJ0 223 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 PAIP1Q9H074 479 aaKnown RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 PLAC1Q9HBJ0 212 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 CAPN10Q9HC96 672 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 TMEM30AQ9NV96 361 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 OCIAD1Q9NX40 245 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 DACT1Q9NYF0 836 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 EPHA6Q9UF33 1036 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF225Q9UK10 706 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 FBXL5Q9UKA1 691 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 VSIG4Q9Y279 399 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 C22orf24Q9Y442 160 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ROBO2Q9HCK4 1378 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZFHX4Q86UP3 3567 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 CSMD1Q96PZ7 3565 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 TMEM150BA6NC51 233 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 A8MU76 341 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 FAM47E-STBD1D6RA91 191 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 AKAP10O43572 662 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 PDE8BO95263 885 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 PIGNO95427 931 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ABL1P00519 1130 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 DCNP07585 359 aaKnown RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 CD63P08962 238 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 HRES1P13985 223 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 FDPSP14324 419 aaKnown RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 NPR2P20594 1047 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 PDIA3P30101 505 aaKnown RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 GP5P40197 560 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 WNT5AP41221 380 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 EMDP50402 254 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 CDH15P55291 814 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 TBX4P57082 545 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 GNB1P62873 340 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 NOMO3P69849 1222 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 SLC6A3Q01959 620 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 AKAP17AQ02040 695 aaKnown RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 FAM160A1Q05DH4 1040 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF211Q13398 564 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 MOBPQ13875 183 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 BOP1Q14137 746 aaKnown RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 NOMO1Q15155 1222 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 PTPN21Q16825 1174 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 RSPO1Q2MKA7 263 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 C4orf46Q504U0 113 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 TDRD12Q587J7 1177 aaKnown RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 LY6G6FQ5SQ64 297 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 SOGA3Q5TF21 947 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 CTR9Q6PD62 1173 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 SMARCD3Q6STE5 483 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 PAQR6Q6TCH4 344 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 RSPO2Q6UXX9 243 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZCCHC23Q6ZST2 131 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 Q71RC1 249 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 FAM57BQ71RH2 274 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 Q75L30 129 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 AACSQ86V21 672 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 CATSPERDQ86XM0 798 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 BRSK2Q8IWQ3 736 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 DHX37Q8IY37 1157 aaKnown RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 BEST3Q8N1M1 668 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 LRRC71Q8N4P6 559 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 PAQR4Q8N4S7 273 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF557Q8N988 423 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 OR5L2Q8NGL0 311 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 FAM216AQ8WUB2 273 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 VPS33AQ96AX1 596 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 TADA1Q96BN2 335 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ERLEC1Q96DZ1 483 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 URB1-AS1Q96HZ7 61 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms