RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 ARF5P84085 180 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 SLC20A2Q08357 652 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 BYSLQ13895 437 aaKnown RBP14.33□□□□□ -0.12
GYPC-203ENST00000409836 ELAVL3Q14576 367 aaKnown RBP14.33□□□□□ -0.12
GYPC-203ENST00000409836 SPDYCQ5MJ68 293 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 C9orf64Q5T6V5 341 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 TXNRD3NBQ6F5E7 133 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 RWDD4Q6NW29 188 aaKnown RBP14.33□□□□□ -0.12
GYPC-203ENST00000409836 RAD9BQ6WBX8 426 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 HMGB4Q8WW32 186 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 PTPRN2Q92932 1015 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 FAF2Q96CS3 445 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 LOXL4Q96JB6 756 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 BAG1Q99933 345 aaPredicted RBP14.33□□□□□ -0.12
GYPC-203ENST00000409836 CEP44Q9C0F1 390 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 ZWILCHQ9H900 591 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.33□□□□□ -0.12
GYPC-203ENST00000409836 PCSK1NQ9UHG2 260 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 SLC25A13Q9UJS0 675 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 SCML1Q9UN30 329 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 PCDHA13Q9Y5I0 950 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 WDR87Q6ZQQ6 2873 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 NUMA1Q14980 2115 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 GOLGA6L6A8MZA4 724 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 EEF2KO00418 725 aaKnown RBP14.32□□□□□ -0.12
GYPC-203ENST00000409836 DCLK1O15075 740 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 PJA2O43164 708 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 CREB3O43889 395 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 SYNCRIPO60506 623 aaKnown RBP14.32□□□□□ -0.12
GYPC-203ENST00000409836 CD160O95971 181 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 KRT7P08729 469 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 HLA-EP13747 358 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 GOT1P17174 413 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 SLC1A1P43005 524 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 PXNP49023 591 aaPredicted RBP14.32□□□□□ -0.12
GYPC-203ENST00000409836 SPA17Q15506 151 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 HADHQ16836 314 aaKnown RBP14.32□□□□□ -0.12
GYPC-203ENST00000409836 USP39Q53GS9 565 aaKnown RBP14.32□□□□□ -0.12
GYPC-203ENST00000409836 PMS2CLQ68D20 193 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 HEATR6Q6AI08 1181 aaKnown RBP14.32□□□□□ -0.12
GYPC-203ENST00000409836 LAIR1Q6GTX8 287 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 RETSATQ6NUM9 610 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 C11orf63Q6NUN7 778 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 PLPP6Q8IY26 295 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 OR7D4Q8NG98 312 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 CASKIN2Q8WXE0 1202 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 ISG20Q96AZ6 181 aaKnown RBP14.32□□□□□ -0.12
GYPC-203ENST00000409836 FAM122AQ96E09 287 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 SPACA7Q96KW9 195 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 CSPG4P5Q96PW8 444 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 ZNF670Q9BS34 389 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 PCED1AQ9H1Q7 454 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 PRDM16Q9HAZ2 1276 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 PCDH18Q9HCL0 1135 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 ATP13A1Q9HD20 1204 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 CWC15Q9P013 229 aaKnown RBP14.32□□□□□ -0.12
GYPC-203ENST00000409836 SLCO3A1Q9UIG8 710 aa14.32□□□□□ -0.12
GYPC-203ENST00000409836 IGHV1OR15-9A0A0B4J2B8 117 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 TTC34A8MYJ7 566 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 H3BRJ5 948 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 SNAP91O60641 907 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 SIN3BO75182 1162 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 ZNF821O75541 412 aaPredicted RBP14.31□□□□□ -0.12
GYPC-203ENST00000409836 NNMTP40261 264 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 MAGEA1P43355 309 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 TAS2R40P59535 323 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 SERINC3Q13530 473 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 POLD3Q15054 466 aaPredicted RBP14.31□□□□□ -0.12
GYPC-203ENST00000409836 SMTNL2Q2TAL5 461 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 PLK5Q496M5 336 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 KCNT1Q5JUK3 1230 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 ZNF776Q68DI1 518 aaPredicted RBP14.31□□□□□ -0.12
GYPC-203ENST00000409836 C22orf39Q6P5X5 142 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 USP30Q70CQ3 517 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 TMPRSS6Q8IU80 811 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 ARHGAP12Q8IWW6 846 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 LZTR1Q8N653 840 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 NPWQ8N729 165 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 RPL10LQ96L21 214 aaKnown RBP14.31□□□□□ -0.12
GYPC-203ENST00000409836 TPSD1Q9BZJ3 242 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 GRPEL1Q9HAV7 217 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 PDFQ9HBH1 243 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 PTPRZ1P23471 2315 aaPredicted RBP14.31□□□□□ -0.12
GYPC-203ENST00000409836 RALGAPA1Q6GYQ0 2036 aa14.31□□□□□ -0.12
GYPC-203ENST00000409836 SDK1Q7Z5N4 2213 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 CEP250Q9BV73 2442 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 RCCD1A6NED2 376 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 ZBTB24O43167 697 aaPredicted RBP14.3□□□□□ -0.12
GYPC-203ENST00000409836 KDELR3O43731 214 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 LRP3O75074 770 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 IPO7O95373 1038 aaKnown RBP14.3□□□□□ -0.12
GYPC-203ENST00000409836 MT-CO1P00395 513 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 ERCC2P18074 760 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 GLDCP23378 1020 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 IL4RP24394 825 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 ACVRL1P37023 503 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 ARL4AP40617 200 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 VAV2P52735 878 aa14.3□□□□□ -0.12
GYPC-203ENST00000409836 RPS14P62263 151 aaKnown RBP14.3□□□□□ -0.12
GYPC-203ENST00000409836 SRSF5Q13243 272 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms