RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 IL31Q6EBC2 164 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 PDIK1LQ8N165 341 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 CNTD1Q8N815 330 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 OR7D4Q8NG98 312 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 USP13Q92995 863 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 TMA16Q96EY4 203 aaKnown RBP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 SERPINB12Q96P63 405 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 FOXP3Q9BZS1 431 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 RBM22Q9NW64 420 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 NINJ2Q9NZG7 142 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 ARHGAP26Q9UNA1 814 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 A0A1B0GVM2 712 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 TYW5A2RUC4 315 aaKnown RBP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 TCAF2A6NFQ2 919 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 SMIM23A6NLE4 172 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 H0Y626 953 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 H3BQF6 201 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 LINC01565O15544 149 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 CLDN11O75508 207 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 PRAMEF12O95522 483 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 RHOCP08134 193 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 DDX6P26196 483 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 GNA12Q03113 381 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 GPS2Q13227 327 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 CEP85LQ5SZL2 805 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 HTR3DQ70Z44 454 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 TRMT10CQ7L0Y3 403 aaKnown RBP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 TDRD5Q8NAT2 981 aaKnown RBP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 LEMD2Q8NC56 503 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 ST13P5Q8NFI4 369 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 RIN3Q8TB24 985 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 ZSCAN18Q8TBC5 510 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 DDI1Q8WTU0 396 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 ARHGEF2Q92974 986 aaKnown RBP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 MRPL38Q96DV4 380 aaKnown RBP12.72□□□□□ -0.37
CHMP3-204ENST00000409727 TEKT5Q96M29 485 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 VAT1Q99536 393 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 GORASP1Q9BQQ3 440 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 GBA3Q9H227 469 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 CENPHQ9H3R5 247 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 LRRC4CQ9HCJ2 640 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 TDP1Q9NUW8 608 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 STOML2Q9UJZ1 356 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 TRHDEQ9UKU6 1024 aa12.72□□□□□ -0.37
CHMP3-204ENST00000409727 MYO18AQ92614 2054 aaKnown RBP12.71□□□□□ -0.37
CHMP3-204ENST00000409727 NOTCH4Q99466 2003 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 SMAPO00193 183 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 ZNF197O14709 1029 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 USP12O75317 370 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 TTC4O95801 387 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 LATS1O95835 1130 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 HLA-DQB2P05538 268 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 GLDCP23378 1020 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 BMP8BP34820 402 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 IFI35P80217 286 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-204ENST00000409727 ZNF33AQ06730 810 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 ITKQ08881 620 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 SLC10A7Q0GE19 358 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 SERINC3Q13530 473 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 SKIDA1Q1XH10 827 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 ANO4Q32M45 955 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 HSP90B2PQ58FF3 399 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 C6orf118Q5T5N4 469 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 RNF219Q5W0B1 726 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-204ENST00000409727 ITPRIPL1Q6GPH6 555 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 PPP1R21Q6ZMI0 780 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 CEP128Q6ZU80 1094 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 GOLGA6L1Q8N7Z2 621 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 HJURPQ8NCD3 748 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-204ENST00000409727 MUC3BQ9H195 1237 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 SFXN1Q9H9B4 322 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 NT5MQ9NPB1 228 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 IGSF9Q9P2J2 1179 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 CHMP2BQ9UQN3 213 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 ACTL7AQ9Y615 435 aa12.71□□□□□ -0.37
CHMP3-204ENST00000409727 PDE4DIPQ5VU43 2346 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 ZNF189O75820 626 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 PEX11BO96011 259 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 PFKLP17858 780 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 TPSB2P20231 275 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 MAGEA6P43360 314 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 YBEYP58557 167 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 MAXP61244 160 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 ZNF844Q08AG5 666 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 CDH18Q13634 790 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 TPSAB1Q15661 275 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 TCEAL5Q5H9L2 206 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 FSCBQ5H9T9 825 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 MARC1Q5VT66 337 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 TTC39BQ5VTQ0 682 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 CHST9Q7L1S5 443 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 CAND1Q86VP6 1230 aaKnown RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 LRRC49Q8IUZ0 686 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 ARID3BQ8IVW6 561 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 FBXO36Q8NEA4 188 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 SPATA22Q8NHS9 363 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 PYROXD1Q8WU10 500 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 NSMCE1Q8WV22 266 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 PPP2R3CQ969Q6 453 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms