RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 FBXO32Q969P5 355 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 TLCD1Q96CP7 247 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 OXNAD1Q96HP4 312 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 SPATA13Q96N96 652 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 ABCB8Q9NUT2 735 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 MARCH2Q9P0N8 246 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 DKK3Q9UBP4 350 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 RPL26L1Q9UNX3 145 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 SLC27A5Q9Y2P5 690 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 A0A1B0GVM2 712 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 PRR23AA6NEV1 266 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 TCAF2A6NFQ2 919 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 SRRM3A6NNA2 597 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 CHURC1-FNTBB4DL54 471 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 GAPDHSO14556 408 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 APOL1O14791 398 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 LINC01565O15544 149 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 IPO7O95373 1038 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 RPL22P35268 128 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 ARCN1P48444 511 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 SUOXP51687 545 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 OXCT1P55809 520 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 OTUD4Q01804 1114 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 STKLD1Q8NE28 680 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 ACTL9Q8TC94 416 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 ATOH1Q92858 354 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 TCEAL4Q96EI5 215 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 TUBGCP5Q96RT8 1024 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 KIFC1Q9BW19 673 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 SLC39A8Q9C0K1 460 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 PPCSQ9HAB8 311 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 LRRC4Q9HBW1 653 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 FAM114A2Q9NRY5 505 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 WDR70Q9NW82 654 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 ABI2Q9NYB9 513 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 CCL26Q9Y258 94 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 SH3BP1Q9Y3L3 701 aa4.97□□□□□ -1.61
R3HDM1-203ENST00000409606 TMCO5BA8MYB1 307 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 TRDMT1O14717 391 aaKnown RBP4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 PRPSAP2O60256 369 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 LUC7L3O95232 432 aaKnown RBP4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 AP2A1O95782 977 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 NCAM1P13591 858 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 OPRD1P41143 372 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 CDH6P55285 790 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 VSNL1P62760 191 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 ZXDAP98168 799 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 PARP6Q2NL67 630 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 NCEH1Q6PIU2 408 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 CCDC137Q6PK04 289 aaKnown RBP4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 TIFABQ6ZNK6 161 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 BZW1Q7L1Q6 419 aaKnown RBP4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 PCGF5Q86SE9 256 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 CELF5Q8N6W0 485 aaKnown RBP4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 WFDC5Q8TCV5 224 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 DEPDC1BQ8WUY9 529 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 AUTS2Q8WXX7 1259 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 CARD6Q9BX69 1037 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 PARD6BQ9BYG5 372 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 WDCPQ9H6R7 721 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 ARFGAP3Q9NP61 516 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 HCFC1R1Q9NWW0 138 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 CDH7Q9ULB5 785 aa4.96□□□□□ -1.61
R3HDM1-203ENST00000409606 IGLV3-16A0A075B6K0 115 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 KRIT1O00522 736 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 MUSKO15146 869 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 RNF8O76064 485 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 TMEM63AO94886 807 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 IL1BP01584 269 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 FDFT1P37268 417 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 CCNFP41002 786 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 KCNQ1P51787 676 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 TIAL1Q01085 375 aaKnown RBP eCLIP4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 SLC20A2Q08357 652 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 C2orf54Q08AI8 447 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 NAB1Q13506 487 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 TEX44Q53QW1 395 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 TCEAL5Q5H9L2 206 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 FAM78AQ5JUQ0 283 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 CDKL3Q8IVW4 592 aaPredicted RBP4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 TP53INP2Q8IXH6 220 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 ZNF567Q8N184 647 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 ASB12Q8WXK4 309 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 SNF8Q96H20 258 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 MRGPRX2Q96LB1 330 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 NUDCD1Q96RS6 583 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 RTKNQ9BST9 563 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 IER2Q9BTL4 223 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 CATSPERBQ9H7T0 1116 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 ZWILCHQ9H900 591 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 SMARCAL1Q9NZC9 954 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 TRPM5Q9NZQ8 1165 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 SFMBT1Q9UHJ3 866 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 ZNF180Q9UJW8 692 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 TRAV19A0A0A6YYK7 116 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 CCDC189A1A4V9 331 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 FAM159BA6NKW6 160 aa4.96□□□□□ -1.62
R3HDM1-203ENST00000409606 MBTPS2O43462 519 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms