RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 DONSONQ9NYP3 566 aa21.12■□□□□ 0.97
USP39-203ENST00000409470 KLHL14Q9P2G3 628 aa21.12■□□□□ 0.97
USP39-203ENST00000409470 MTRRQ9UBK8 725 aa21.12■□□□□ 0.97
USP39-203ENST00000409470 IPO11Q9UI26 975 aaKnown RBP21.12■□□□□ 0.97
USP39-203ENST00000409470 MICAL3Q7RTP6 2002 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 MAGEB16A2A368 324 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 C2CD2LO14523 706 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 TLR5O60602 858 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 ANXA9O76027 345 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 TPH1P17752 444 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 ATF6P18850 670 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 OR1D2P34982 312 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 CCNFP41002 786 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 ETV4P43268 484 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 ANO4Q32M45 955 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 SPOUT1Q5T280 376 aaKnown RBP21.11■□□□□ 0.97
USP39-203ENST00000409470 SLC8B1Q6J4K2 584 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 CDHR3Q6ZTQ4 885 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 MANSC1Q9H8J5 431 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 ACTR5Q9H9F9 607 aaPredicted RBP21.11■□□□□ 0.97
USP39-203ENST00000409470 PPARGC1AQ9UBK2 798 aaKnown RBP21.11■□□□□ 0.97
USP39-203ENST00000409470 PRKAG3Q9UGI9 489 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 ATP11BQ9Y2G3 1177 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 USP1O94782 785 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 DHRS4L1P0CG22 281 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 NDST2P52849 883 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 ANKRD20A4Q4UJ75 823 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 LACTB2Q53H82 288 aaPredicted RBP21.11■□□□□ 0.97
USP39-203ENST00000409470 CNKSR3Q6P9H4 555 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 TIFABQ6ZNK6 161 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 TMEM135Q86UB9 458 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 NDUFAF2Q8N183 169 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 UMODL1-AS1Q8N2C9 162 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 MICALL1Q8N3F8 863 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 ZNF419Q96HQ0 510 aaPredicted RBP21.11■□□□□ 0.97
USP39-203ENST00000409470 IGSF21Q96ID5 467 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 CWH43Q9H720 699 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 ABCF3Q9NUQ8 709 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 TMEM248Q9NWD8 314 aa21.11■□□□□ 0.97
USP39-203ENST00000409470 GREB1Q4ZG55 1949 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 CNTN5O94779 1100 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 MT-CYBP00156 380 aaPredicted RBP21.1■□□□□ 0.97
USP39-203ENST00000409470 HLA-DQB2P05538 268 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 TUFMP49411 452 aaKnown RBP21.1■□□□□ 0.97
USP39-203ENST00000409470 MNX1P50219 401 aaPredicted RBP21.1■□□□□ 0.97
USP39-203ENST00000409470 ALFQ53S48 1182 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 FBXL22Q6P050 247 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 ZNF449Q6P9G9 518 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 ZNF276Q8N554 614 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 IPMKQ8NFU5 416 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 THOC1Q96FV9 657 aaKnown RBP21.1■□□□□ 0.97
USP39-203ENST00000409470 TBL1YQ9BQ87 522 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 UBE2OQ9C0C9 1292 aaKnown RBP21.1■□□□□ 0.97
USP39-203ENST00000409470 NOL6Q9H6R4 1146 aaKnown RBP21.1■□□□□ 0.97
USP39-203ENST00000409470 MKS1Q9NXB0 559 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 GGT7Q9UJ14 662 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 PLLPQ9Y342 182 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 PSAT1Q9Y617 370 aa21.1■□□□□ 0.97
USP39-203ENST00000409470 NYNRINQ9P2P1 1898 aaKnown RBP21.09■□□□□ 0.97
USP39-203ENST00000409470 FAM237BA0A1B0GVD1 139 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 ZDHHC11BP0C7U3 371 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 GEMP55040 296 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 SPRED3Q2MJR0 410 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 CHSY1Q86X52 802 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 ZNF354CQ86Y25 554 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 PPM1EQ8WY54 764 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 IGSF8Q969P0 613 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 RPRD1AQ96P16 312 aaPredicted RBP21.09■□□□□ 0.97
USP39-203ENST00000409470 PPP1R2P1Q96PQ5 205 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 CHRAC1Q9NRG0 131 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 TMEM39AQ9NV64 488 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 BACE2Q9Y5Z0 518 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 FSBPO95073 299 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 IGLV3-27P01718 113 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 DNAJB2P25686 324 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 SERPINB4P48594 390 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 KPNA1P52294 538 aaPredicted RBP21.09■□□□□ 0.97
USP39-203ENST00000409470 RING1Q06587 406 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 ACTN3Q08043 901 aaPredicted RBP21.09■□□□□ 0.97
USP39-203ENST00000409470 KLHDC8BQ8IXV7 354 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 MFSD3Q96ES6 412 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 HMCESQ96FZ2 354 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 CPNE1Q99829 537 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 TTLL2Q9BWV7 592 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 VN1R3Q9BXE9 311 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 SOX13Q9UN79 622 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 CAPN7Q9Y6W3 813 aa21.09■□□□□ 0.97
USP39-203ENST00000409470 IGLV3-10A0A075B6K4 115 aa21.08■□□□□ 0.97
USP39-203ENST00000409470 ZCWPW2A0A1B0GU75 182 aa21.08■□□□□ 0.97
USP39-203ENST00000409470 GP5P40197 560 aa21.08■□□□□ 0.97
USP39-203ENST00000409470 PDE1BQ01064 536 aa21.08■□□□□ 0.97
USP39-203ENST00000409470 OTOAQ7RTW8 1153 aa21.08■□□□□ 0.97
USP39-203ENST00000409470 ZNF512Q96ME7 567 aaPredicted RBP21.08■□□□□ 0.97
USP39-203ENST00000409470 FICDQ9BVA6 458 aa21.08■□□□□ 0.97
USP39-203ENST00000409470 NACA2Q9H009 215 aa21.08■□□□□ 0.97
USP39-203ENST00000409470 TBX21Q9UL17 535 aa21.08■□□□□ 0.97
USP39-203ENST00000409470 EFEMP2O95967 443 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 ITGA2BP08514 1039 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 CRHR1P34998 444 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 FRG1Q14331 258 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms