RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 PRMT9Q6P2P2 845 aa25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 CYP4Z2PQ8N1L4 340 aa25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 GFM2Q969S9 779 aaKnown RBP25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 GAS2L1Q99501 681 aaPredicted RBP25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 FAM220BPB1ANY3 271 aa25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 SERPINI2O75830 405 aa25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 CLTBP09497 229 aa25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 CCNB1P14635 433 aa25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 MTDHQ86UE4 582 aaKnown RBP25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 KLHL20Q9Y2M5 609 aa25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 GPSM3Q9Y4H4 160 aa25.44■■□□□ 1.66
SPIRE1-202ENST00000409402 ASTN2O75129 1339 aaPredicted RBP25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 CHADO15335 359 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 PARNO95453 639 aaKnown RBP25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 CNPP09543 421 aaKnown RBP25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 ATP4AP20648 1035 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 SDHAF4Q5VUM1 108 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 ICE2Q659A1 982 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 MSL3Q8N5Y2 521 aaKnown RBP25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 CAPNS2Q96L46 248 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 TM6SF2Q9BZW4 377 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 NT5C1B-RDH14C9J2C7 533 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 HTR1BP28222 390 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 PRKCIP41743 596 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 CRYMQ14894 314 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 FAM71AQ8IYT1 594 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 DNAJC19Q96DA6 116 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 HSD17B14Q9BPX1 270 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 CDK16Q00536 496 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 CNBD2Q96M20 576 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 SIK3Q9Y2K2 1263 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 OR1D2P34982 312 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 SLC9A5Q14940 896 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 FAM35AQ86V20 835 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 THAP1Q9NVV9 213 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 USP2O75604 605 aaPredicted RBP25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 EEF1DP3Q658K8 133 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 AFTPHQ6ULP2 937 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 UBE2E3Q969T4 207 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 MAP10Q9P2G4 905 aa25.43■■□□□ 1.66
SPIRE1-202ENST00000409402 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 TLR5O60602 858 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 ANXA5P08758 320 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 SP100P23497 879 aaPredicted RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 GABRR2P28476 465 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 TARBP2Q15633 366 aaKnown RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 GSTA3Q16772 222 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 POM121L1PQ3SYA9 428 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 LYPLAL1Q5VWZ2 237 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 COLGALT2Q8IYK4 626 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 ATL1Q8WXF7 558 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 DUSP16Q9BY84 665 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 NDUFAF1Q9Y375 327 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 QSOX1O00391 747 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 ARF4P18085 180 aaPredicted RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 CXCR2P25025 360 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 ABL2P42684 1182 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 MRPS5P82675 430 aaKnown RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 TBL3Q12788 808 aaKnown RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 TRAF2Q12933 501 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 ITGB3BPQ13352 177 aaPredicted RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 ZNF786Q8N393 782 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 ZCCHC9Q8N567 271 aaKnown RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 GLIS3Q8NEA6 775 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 OR5B17Q8NGF7 314 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 NXF3Q9H4D5 531 aaKnown RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 RAD21L1Q9H4I0 556 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 TLE6Q9H808 572 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 NUDT14O95848 222 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 TKTP29401 623 aaKnown RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 SPRYD7Q5W111 196 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 NKAPQ8N5F7 415 aaKnown RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 TCP10LQ8TDR4 215 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 ZC4H2Q9NQZ6 224 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 CCDC154A6NI56 674 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 CCDC159P0C7I6 412 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 PABPC1P11940 636 aaKnown RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 BRCC3P46736 316 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 C9orf57Q5W0N0 161 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 FBXW10Q5XX13 1052 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 DET1Q7L5Y6 550 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 ATG16L2Q8NAA4 619 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 OR52K1Q8NGK4 314 aa25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 DDX28Q9NUL7 540 aaKnown RBP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.42■■□□□ 1.66
SPIRE1-202ENST00000409402 ERBB2P04626 1255 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 ACSM2AQ08AH3 577 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 ACSM2BQ68CK6 577 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 CLYBLQ8N0X4 340 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 USP6NLQ92738 828 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 ZNHIT2Q9UHR6 403 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 CALCAP01258 141 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 DSG1Q02413 1049 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 MSLNQ13421 630 aaPredicted RBP25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 MEA1Q16626 185 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 NPNTQ6UXI9 565 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 ABHD15Q6UXT9 468 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 PIF1Q9H611 641 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 CNGB3Q9NQW8 809 aa25.41■■□□□ 1.66
SPIRE1-202ENST00000409402 TMCO1Q9UM00 188 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms