RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 SUN2Q9UH99 717 aa21.31■■□□□ 1
C4orf48-201ENST00000409248 NYNRINQ9P2P1 1898 aaKnown RBP21.3■■□□□ 1
C4orf48-201ENST00000409248 VPS13AQ96RL7 3174 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 ZNF217O75362 1048 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 HLA-EP13747 358 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 OR1E1P30953 314 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 NNMTP40261 264 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 ZNF135P52742 658 aaPredicted RBP21.3■■□□□ 1
C4orf48-201ENST00000409248 CAMK2GQ13555 558 aaPredicted RBP21.3■■□□□ 1
C4orf48-201ENST00000409248 KRT81Q14533 505 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 LPAL2Q16609 132 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 TXNRD3NBQ6F5E7 133 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 RWDD4Q6NW29 188 aaKnown RBP21.3■■□□□ 1
C4orf48-201ENST00000409248 KIAA1324Q6UXG2 1013 aaKnown RBP21.3■■□□□ 1
C4orf48-201ENST00000409248 ZNF783Q6ZMS7 281 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 PEX26Q7Z412 305 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 TRIM58Q8NG06 486 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 ERLEC1Q96DZ1 483 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 MRGPRX1Q96LB2 322 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 C2orf49Q9BVC5 232 aaPredicted RBP21.3■■□□□ 1
C4orf48-201ENST00000409248 SLC25A13Q9UJS0 675 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 AMFRQ9UKV5 643 aa21.3■■□□□ 1
C4orf48-201ENST00000409248 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.3■■□□□ 1
C4orf48-201ENST00000409248 CREB3O43889 395 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 LRIG2O94898 1065 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 RHOQP17081 205 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 HTR7P34969 479 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 P2RY2P41231 377 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 MAPKAPK2P49137 400 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 DPYSL2Q16555 572 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 CA9Q16790 459 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 PPP6R3Q5H9R7 873 aaPredicted RBP21.29■■□□□ 1
C4orf48-201ENST00000409248 PYROXD2Q8N2H3 581 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 FAM160A2Q8N612 972 aaPredicted RBP21.29■■□□□ 1
C4orf48-201ENST00000409248 ZNF366Q8N895 744 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 DCAF4L2Q8NA75 395 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 OR2T3Q8NH03 318 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 ZC3H10Q96K80 434 aaKnown RBP21.29■■□□□ 1
C4orf48-201ENST00000409248 MRGPRX3Q96LB0 322 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 KCTD15Q96SI1 283 aaPredicted RBP21.29■■□□□ 1
C4orf48-201ENST00000409248 PRDM16Q9HAZ2 1276 aa21.29■■□□□ 1
C4orf48-201ENST00000409248 DDX56Q9NY93 547 aaKnown RBP21.29■■□□□ 1
C4orf48-201ENST00000409248 ZFHX2Q9C0A1 2572 aaPredicted RBP21.29■■□□□ 1
C4orf48-201ENST00000409248 ILVBLA1L0T0 632 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 USP27XA6NNY8 438 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 RHOBTB1O94844 696 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 FTCDO95954 541 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 ETFBP38117 255 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 CTSOP43234 321 aaPredicted RBP21.28■■□□□ 1
C4orf48-201ENST00000409248 TPI1P60174 286 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 HNRNPA1L2Q32P51 320 aaKnown RBP21.28■■□□□ 1
C4orf48-201ENST00000409248 ODF2Q5BJF6 829 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 NT5DC3Q86UY8 548 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 KBTBD6Q86V97 674 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 KCTD6Q8NC69 237 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 OR52K2Q8NGK3 314 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 UBE2Q2Q8WVN8 375 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 PRCCQ92733 491 aaPredicted RBP21.28■■□□□ 1
C4orf48-201ENST00000409248 ALG14Q96F25 216 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 MYO19Q96H55 970 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 LOXL4Q96JB6 756 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 MAGEB5Q9BZ81 275 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 KCND1Q9NSA2 647 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 ZNF212Q9UDV6 495 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 OR51B4Q9Y5P0 310 aa21.28■■□□□ 1
C4orf48-201ENST00000409248 EDDM13A0A1B0GTR0 161 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 MIF4GDA9UHW6 222 aaKnown RBP21.27■■□□□ 1
C4orf48-201ENST00000409248 FAM72CH0Y354 149 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 H3BRJ5 948 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 EEF2KO00418 725 aaKnown RBP21.27■■□□□ 1
C4orf48-201ENST00000409248 KIF5CO60282 957 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 KRT1P04264 644 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 MSNP26038 577 aaKnown RBP21.27■■□□□ 1
C4orf48-201ENST00000409248 CTNNA2P26232 953 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 CTNNA1P35221 906 aaKnown RBP21.27■■□□□ 1
C4orf48-201ENST00000409248 ARL4AP40617 200 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 VASPP50552 380 aaPredicted RBP21.27■■□□□ 1
C4orf48-201ENST00000409248 CDH6P55285 790 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 SEMA3BQ13214 749 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 PDK2Q15119 407 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 MAP7D1Q3KQU3 841 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 PLK5Q496M5 336 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 ARTNQ5T4W7 220 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 FAM72AQ5TYM5 149 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 FAM72DQ6L9T8 149 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 SLC36A4Q6YBV0 504 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 METTL3Q86U44 580 aaKnown RBP21.27■■□□□ 1
C4orf48-201ENST00000409248 FAM72BQ86X60 149 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 TMPRSS6Q8IU80 811 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 MAP7D3Q8IWC1 876 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 RLN3Q8WXF3 142 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 SIPA1Q96FS4 1042 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 MKRN2Q9H000 416 aaKnown RBP21.27■■□□□ 1
C4orf48-201ENST00000409248 PCDH18Q9HCL0 1135 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 KLHL11Q9NVR0 708 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 TMEM248Q9NWD8 314 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 INVSQ9Y283 1065 aa21.27■■□□□ 1
C4orf48-201ENST00000409248 OTOGLQ3ZCN5 2332 aa21.27■□□□□ 0.99
C4orf48-201ENST00000409248 TARSL2A2RTX5 802 aaKnown RBP21.26■□□□□ 0.99
C4orf48-201ENST00000409248 CCDC66A2RUB6 948 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms