RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 SHBQ15464 509 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TAF5Q15542 800 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D3GQ6DHY5 549 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D3CQ6IPX1 549 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 DHRS13Q6UX07 377 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 ENOSF1Q7L5Y1 443 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TMPRSS12Q86WS5 348 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 GATAD2AQ86YP4 633 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D3Q8IZP1 549 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 CCAR2Q8N163 923 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 SAP25Q8TEE9 199 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 SERAC1Q96JX3 654 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 PRMT1Q99873 361 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 FAM117AQ9C073 453 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TPX2Q9ULW0 747 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 UBR5O95071 2799 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 E9PAM4 449 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 TLR4O00206 839 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 BIN1O00499 593 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 ENC1O14682 589 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 YKT6O15498 198 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 FGFR1OPO95684 399 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 GLI1P08151 1106 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 C1SP09871 688 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 CDK4P11802 303 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 VAV1P15498 845 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 PDGFRAP16234 1089 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 ABCB4P21439 1286 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 GNA15P30679 374 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 CCR1P32246 355 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 NUMBP49757 651 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 ADPRHP54922 357 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 OXCT1P55809 520 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 NXPH1P58417 271 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 CXADRP78310 365 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 CDK17Q00537 523 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 PAK1Q13153 545 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 PDCLQ13371 301 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 LY6DQ14210 128 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 ELAVL3Q14576 367 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 SLC45A4Q5BKX6 768 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 EFHC1Q5JVL4 640 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 RABGAP1LQ5R372 815 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 TTC39BQ5VTQ0 682 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 GPR155Q7Z3F1 870 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 PRPF39Q86UA1 669 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 DEFB106AQ8N104 65 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 WDTC1Q8N5D0 677 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 LSM14AQ8ND56 463 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 RNF34Q969K3 372 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 CNDP2Q96KP4 475 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 FAM81BQ96LP2 452 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 SPAG5Q96R06 1193 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 PPP1R9BQ96SB3 815 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 FAM204AQ9H8W3 233 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 ERVMER34-1Q9H9K5 563 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 ACP6Q9NPH0 428 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 GDF3Q9NR23 364 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 KIAA1468Q9P260 1216 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 PCDHGA1Q9Y5H4 931 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 BOD1L1Q8NFC6 3051 aa9.44□□□□□ -0.9
NIF3L1-203ENST00000409129 FLNCQ14315 2725 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 SYNJ2BP-COX16A0A087WUM0 186 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 A0A1B0GVM2 712 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 TCAF2A6NFQ2 919 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 CBX4O00257 560 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 LATO43561 262 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 ATP9BO43861 1147 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 RTN2O75298 545 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 JUPP14923 745 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 DRD3P35462 400 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 USP8P40818 1118 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 RXRGP48443 463 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 ARRB1P49407 418 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 PPP2CBP62714 309 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 PPP2CAP67775 309 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 BNIP3Q12983 259 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 DNAJC3Q13217 504 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 BECN1Q14457 450 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 ACCSLQ4AC99 568 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 TAF1BQ53T94 588 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 FAM46CQ5VWP2 391 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 NAPEPLDQ6IQ20 393 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 CXorf57Q6NSI4 855 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 FBXL22Q6P050 247 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 GJB7Q6PEY0 223 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 TRIM65Q6PJ69 517 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 LRRC69Q6ZNQ3 347 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 DSG4Q86SJ6 1040 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 CIR1Q86X95 450 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 EID2Q8N6I1 236 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 MFSD2AQ8NA29 543 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 FRS2Q8WU20 508 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 OR8D1Q8WZ84 308 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 FAM131CQ96AQ9 280 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 ALG14Q96F25 216 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 PPP1R13BQ96KQ4 1090 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 SLC2A13Q96QE2 648 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 FEM1AQ9BSK4 669 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms