RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 DESI2Q9BSY9 194 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 C2orf49Q9BVC5 232 aaPredicted RBP10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 EPC1Q9H2F5 836 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 GOLPH3Q9H4A6 298 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 CATSPERBQ9H7T0 1116 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 GRPEL1Q9HAV7 217 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 PRDM16Q9HAZ2 1276 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 PRSS16Q9NQE7 514 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 IMPACTQ9P2X3 320 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 HYOU1Q9Y4L1 999 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 PCDHA13Q9Y5I0 950 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 VPS13AQ96RL7 3174 aa10.53□□□□□ -0.72
TSPAN9-202ENST00000407263 CCDC163A0A0D9SF12 145 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 EDDM13A0A1B0GTR0 161 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 ILVBLA1L0T0 632 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 EIF3CLB5ME19 914 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 H3BRJ5 948 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 K7ERQ8 282 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 DAPK3O43293 454 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 LCA5LO95447 670 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 MT-CO1P00395 513 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 LMNAP02545 664 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 CD48P09326 243 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 SRCP12931 536 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 TNNT1P13805 278 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 NNMTP40261 264 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 ARL4AP40617 200 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 NOP2P46087 812 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 CDH6P55285 790 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 SULT2A1Q06520 285 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 DPYSL2Q16555 572 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 HADHQ16836 314 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 HNRNPA1L2Q32P51 320 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 USP39Q53GS9 565 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 C22orf39Q6P5X5 142 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 FAM124AQ86V42 546 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 TMPRSS6Q8IU80 811 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 TMTC1Q8IUR5 882 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 RHOT2Q8IXI1 618 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 CCDC170Q8IYT3 715 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 STK40Q8N2I9 435 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 SH2D3CQ8N5H7 860 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 NPWQ8N729 165 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 ATP11CQ8NB49 1132 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 PRCCQ92733 491 aaPredicted RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 ARHGEF2Q92974 986 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 HMCESQ96FZ2 354 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 PPP1R9BQ96SB3 815 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 EIF3CQ99613 913 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 NCAPGQ9BPX3 1015 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 TNKS2Q9H2K2 1166 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 NOL6Q9H6R4 1146 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 PCDH18Q9HCL0 1135 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 CWC15Q9P013 229 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 NCDNQ9UBB6 729 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 RAB23Q9ULC3 237 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 INTUQ9ULD6 942 aa10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 FCF1Q9Y324 198 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 REXO2Q9Y3B8 237 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 ATXN2Q99700 1313 aaKnown RBP10.52□□□□□ -0.73
TSPAN9-202ENST00000407263 PI4KAP42356 2102 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 IGHV1OR15-9A0A0B4J2B8 117 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 GOLGA6L3A6NEY3 463 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 RASA4BC9J798 803 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 PROB1E7EW31 1015 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 RASA4O43374 803 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 SMAD6O43541 496 aaKnown RBP10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 BUB1O43683 1085 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 MTA2O94776 668 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 KRT1P04264 644 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 PTMAP06454 111 aaKnown RBP10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 ACADMP11310 421 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 ERCC2P18074 760 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 MAN1A1P33908 653 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 CNR2P34972 360 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 P2RY2P41231 377 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 MRE11P49959 708 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 SERPINH1P50454 418 aaKnown RBP10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 RPS14P62263 151 aaKnown RBP10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 MMRN1Q13201 1228 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 DPYSQ14117 519 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 POLD3Q15054 466 aaPredicted RBP10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 DLG2Q15700 870 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 MAP7D1Q3KQU3 841 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 POM121L1PQ3SYA9 428 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 ATP13A4Q4VNC1 1196 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 ZNF776Q68DI1 518 aaPredicted RBP10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 ZNF783Q6ZMS7 281 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 KIAA1328Q86T90 577 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 ALYREFQ86V81 257 aaKnown RBP10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 MMAAQ8IVH4 418 aaKnown RBP10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 DEFB119Q8N690 84 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 SUMF1Q8NBK3 374 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 GRIN3AQ8TCU5 1115 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 TEKT4Q8WW24 435 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 PTPRN2Q92932 1015 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 SIPA1Q96FS4 1042 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 CALN1Q9BXU9 219 aa10.51□□□□□ -0.73
TSPAN9-202ENST00000407263 TM6SF2Q9BZW4 377 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms