RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 PRKAG3Q9UGI9 489 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 IPO11Q9UI26 975 aaKnown RBP25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 HMX2A2RU54 273 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 DHRS4L1P0CG22 281 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 ERVK-10P10266 1014 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 OR1D2P34982 312 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 ETV4P43268 484 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 ANKRD20A4Q4UJ75 823 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 SLC8B1Q6J4K2 584 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 KIAA1841Q6NSI8 718 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 TFAP2DQ7Z6R9 452 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 CNPY4Q8N129 248 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 UMODL1-AS1Q8N2C9 162 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 CCDC63Q8NA47 563 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 SPATA22Q8NHS9 363 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 UBE2OQ9C0C9 1292 aaKnown RBP25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 CWH43Q9H720 699 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 MANSC1Q9H8J5 431 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 TMEM248Q9NWD8 314 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 MKS1Q9NXB0 559 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 KLHL14Q9P2G3 628 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 SLC17A6Q9P2U8 582 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 FAM237BA0A1B0GVD1 139 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 USP1O94782 785 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 ZDHHC11BP0C7U3 371 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 NEFHP12036 1026 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 TPH1P17752 444 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 DNAJB2P25686 324 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 TUFMP49411 452 aaKnown RBP25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 KPNA1P52294 538 aaPredicted RBP25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 GEMP55040 296 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 FRG1Q14331 258 aaKnown RBP25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 ACBD5Q5T8D3 534 aaPredicted RBP25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 RAP1GAP2Q684P5 730 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 TMEM135Q86UB9 458 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 CHSY1Q86X52 802 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 IGSF21Q96ID5 467 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 TBL1YQ9BQ87 522 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 TTLL2Q9BWV7 592 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 NOL6Q9H6R4 1146 aaKnown RBP25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 CCSER2Q9H7U1 834 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 ALG13Q9NP73 1137 aaKnown RBP25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 PLLPQ9Y342 182 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 BACE2Q9Y5Z0 518 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 MICAL3Q7RTP6 2002 aa25.15■■□□□ 1.62
DNMT3A-206ENST00000406659 GREB1Q4ZG55 1949 aa25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 TLR5O60602 858 aa25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 IGLV3-27P01718 113 aa25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 RPL17P18621 184 aaKnown RBP25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 ATF6P18850 670 aa25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 MNX1P50219 401 aaPredicted RBP25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 RING1Q06587 406 aa25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 SPOUT1Q5T280 376 aaKnown RBP25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 NDUFAF2Q8N183 169 aa25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 ZNF276Q8N554 614 aa25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 PPM1EQ8WY54 764 aa25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 PCMTD2Q9NV79 361 aa25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 ATP11BQ9Y2G3 1177 aa25.14■■□□□ 1.62
DNMT3A-206ENST00000406659 IGLV3-10A0A075B6K4 115 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 FSBPO95073 299 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 EFEMP2O95967 443 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 FBXL22Q6P050 247 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 MICALL1Q8N3F8 863 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 CEP295NLQ96MC4 621 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 CDK5RAP1Q96SZ6 601 aaKnown RBP25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 TMEM39AQ9NV64 488 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 SOX13Q9UN79 622 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 C2CD2LO14523 706 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 CNTN5O94779 1100 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 HLA-DQB2P05538 268 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 ACTN3Q08043 901 aaPredicted RBP25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 MTA1Q13330 715 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 SMAD1Q15797 465 aaKnown RBP25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 ALFQ53S48 1182 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 CDHR3Q6ZTQ4 885 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 IPMKQ8NFU5 416 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 CPNE1Q99829 537 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 VN1R3Q9BXE9 311 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 ABCF3Q9NUQ8 709 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 IL1RAPL1Q9NZN1 696 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 PSAT1Q9Y617 370 aa25.13■■□□□ 1.61
DNMT3A-206ENST00000406659 NYNRINQ9P2P1 1898 aaKnown RBP25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 MT-CYBP00156 380 aaPredicted RBP25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 CRHR1P34998 444 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 GP5P40197 560 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 SERPINB4P48594 390 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 GRTP1Q5TC63 336 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 RNF43Q68DV7 783 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 ACMSDQ8TDX5 336 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 IGSF8Q969P0 613 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 HMCESQ96FZ2 354 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 FICDQ9BVA6 458 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 CRISPLD2Q9H0B8 497 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 TBX21Q9UL17 535 aa25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 HBS1LQ9Y450 684 aaKnown RBP25.12■■□□□ 1.61
DNMT3A-206ENST00000406659 ZCWPW2A0A1B0GU75 182 aa25.11■■□□□ 1.61
DNMT3A-206ENST00000406659 DRGXA6NNA5 263 aa25.11■■□□□ 1.61
DNMT3A-206ENST00000406659 PDE1BQ01064 536 aa25.11■■□□□ 1.61
DNMT3A-206ENST00000406659 C1orf53Q5VUE5 145 aa25.11■■□□□ 1.61
DNMT3A-206ENST00000406659 FYB2Q5VWT5 728 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms