RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PLEKHN1Q494U1 663 aaPredicted RBP8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 FAM131AQ6UXB0 335 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 PHF10Q8WUB8 498 aaKnown RBP8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 TIPINQ9BVW5 301 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC39A8Q9C0K1 460 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 TMEM51Q9NW97 253 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 BABAM1Q9NWV8 329 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC28A1O00337 649 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 CLDN3O15551 220 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 RPLP0P05388 317 aaKnown RBP8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 GARTP22102 1010 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 VAMP1P23763 118 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 CYP2C18P33260 490 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 FAM102AQ5T9C2 384 aaPredicted RBP8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 CLEC4GQ6UXB4 293 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 TRAPPC12Q8WVT3 735 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 MARK4Q96L34 752 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 RBM15Q96T37 977 aaKnown RBP eCLIP8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 CLDN25C9JDP6 229 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 HIBADHP31937 336 aaKnown RBP8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 SERPINB5P36952 375 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 CHI3L2Q15782 390 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 MPP5Q8N3R9 675 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 ANKRD13CQ8N6S4 541 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 CCDC74BQ96LY2 380 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 HIST1H2AAQ96QV6 131 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 C19orf44Q9H6X5 657 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 GLRA3O75311 464 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 PPM1AP35813 382 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 HTR2BP41595 481 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 NR1H2P55055 460 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 DPY19L2Q6NUT2 758 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 GORASP1Q9BQQ3 440 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 MAGEE1Q9HCI5 957 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC40A1Q9NP59 571 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 STK32BQ9NY57 414 aa8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 ZMAT5Q9UDW3 170 aaKnown RBP8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 POLR3HQ9Y535 204 aaPredicted RBP8.71□□□□□ -1.02
CACNA1C-220ENST00000399655 WDR7Q9Y4E6 1490 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 TMEM132BQ14DG7 1078 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ARSKQ6UWY0 536 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 TRNT1Q96Q11 434 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ERP44Q9BS26 406 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 DCLK3Q9C098 648 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 CRISPLD1Q9H336 500 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 KCNH1O95259 989 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 LUMP51884 338 aaPredicted RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ADAM17P78536 824 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 INSCQ1MX18 579 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 METTL21CQ5VZV1 264 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 NUP54Q7Z3B4 507 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ZC3HC1Q86WB0 502 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 SNAPC3Q92966 411 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 TRIM43Q96BQ3 446 aaPredicted RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 RRAGDQ9NQL2 400 aaPredicted RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 DRG1Q9Y295 367 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 AVILO75366 819 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 IFNA17P01571 189 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 CYP3A4P08684 503 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 CCNE1P24864 410 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 COL28A1Q2UY09 1125 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 TSHZ3Q63HK5 1081 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 KATNAL2Q8IYT4 538 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 OR7G1Q8NGA0 311 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ITFG1Q8TB96 612 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 POF1BQ8WVV4 589 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 AUTS2Q8WXX7 1259 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 TEFMQ96QE5 360 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 GRHL1Q9NZI5 618 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 M0QYV0 167 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 KHNYNO15037 678 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC26A4O43511 780 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 MT-CO2P00403 227 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 TFE3P19532 575 aaPredicted RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 GNA15P30679 374 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 MRPS10P82664 201 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC3A1Q07837 685 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 NME3Q13232 169 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 AKR1C8PQ5T2L2 129 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 TMEM270Q6UE05 265 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 S100A7AQ86SG5 101 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ACBD4Q8NC06 268 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 AHCYL2Q96HN2 611 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 PNMA5Q96PV4 448 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 MOCS1Q9NZB8 636 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 OR5H15A6NDH6 313 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 OR5H14A6NHG9 310 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 OR5H1A6NKK0 313 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ECM2O94769 699 aaPredicted RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 FRG1Q14331 258 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 PAGE2BQ5JRK9 111 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 EXOSC6Q5RKV6 272 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ESPNLQ6ZVH7 1005 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 LYSMD3Q7Z3D4 306 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 SNX20Q7Z614 316 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ARHGAP12Q8IWW6 846 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 DGCR6LQ9BY27 220 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 LMAN2LQ9H0V9 348 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 C1orf196B1AJZ1 125 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms