RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IL4RP24394 825 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 CHRNA5P30532 468 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 CAPSQ13938 189 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 XKR3Q5GH77 459 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 FAM47CQ5HY64 1035 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 STRA8Q7Z7C7 330 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 PATL1Q86TB9 770 aaKnown RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 AHI1Q8N157 1196 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 PYROXD2Q8N2H3 581 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 FAM47BQ8NA70 645 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 ACVR1CQ8NER5 493 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 CAMKK2Q96RR4 588 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 OMDQ99983 421 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 LPIN3Q9BQK8 851 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 CNPY3Q9BT09 278 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 FRMD8P1Q9BZ68 369 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 ELOVL4Q9GZR5 314 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 IL1RL2Q9HB29 575 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 PCDH18Q9HCL0 1135 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 SYBUQ9NX95 663 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 GMPR2Q9P2T1 348 aaKnown RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 RIMS3Q9UJD0 308 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 RAB26Q9ULW5 256 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 SH3GLB1Q9Y371 365 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 RNF11Q9Y3C5 154 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 CDY2AQ9Y6F7 541 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 CDY1Q9Y6F8 540 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 FAM149AA5PLN7 773 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 GIPC1O14908 333 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 PHGDHO43175 533 aaKnown RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 PAPSS1O43252 624 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 B4GALT5O43286 388 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 MED7O43513 233 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 PIGNO95427 931 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 NPR1P16066 1061 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 GRK2P25098 689 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 CCND2P30279 289 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 ALDH1B1P30837 517 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 MAGEA8P43361 318 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 PTPN11Q06124 597 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 PTK2BQ14289 1009 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 GRAMD4Q6IC98 578 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 CHST15Q7LFX5 561 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 BRSK2Q8IWQ3 736 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 DNAAF3Q8N9W5 541 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 DDI1Q8WTU0 396 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 ZNF669Q96BR6 464 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 APBA2Q99767 749 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 GATA5Q9BWX5 397 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 TIMMDC1Q9NPL8 285 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 ZNF302Q9NR11 478 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 DNAJC28Q9NX36 388 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 SELENONQ9NZV5 590 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 THEGQ9P2T0 379 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 ZNF70Q9UC06 446 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 SFMBT1Q9UHJ3 866 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 SLC39A10Q9ULF5 831 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 CDC14AQ9UNH5 594 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 MRPL42Q9Y6G3 142 aaKnown RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 A0A096LPK6 155 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 RGSL1A5PLK6 1076 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 KCNK1O00180 336 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 RGS20O76081 388 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 TPH1P17752 444 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 EPHX2P34913 555 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 ZNF143P52747 638 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 SP2Q02086 613 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 MGAT5BQ3V5L5 792 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 OGFOD2Q6N063 350 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 C16orf89Q6UX73 402 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 GK5Q6ZS86 529 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 NIPA1Q7RTP0 329 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 COLGALT1Q8NBJ5 622 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 FNDC8Q8TC99 324 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 KBTBD7Q8WVZ9 684 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 GCOM2Q9BZD3 368 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 TASP1Q9H6P5 420 aa10.07□□□□□ -0.8
PTCHD4-202ENST00000398738 KCNU1A8MYU2 1149 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 H0YCG3 227 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 J3QRK9 145 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 AKAP10O43572 662 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 COQ9O75208 318 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 TIPRLO75663 272 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 PRKCGP05129 697 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 UGT1A6P19224 532 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 VARSP26640 1264 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 SDC4P31431 198 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 NME5P56597 212 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 ZNF423Q2M1K9 1284 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 SNRNP48Q6IEG0 339 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 EPGNQ6UW88 154 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 RPS27LQ71UM5 84 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 VSIG10LQ86VR7 867 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 TRIM50Q86XT4 487 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 FAM110BQ8TC76 370 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 FBXL8Q96CD0 374 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 RMND5BQ96G75 393 aaPredicted RBP10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 ANKRD36BP1Q96IX9 119 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 ACO2Q99798 780 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 SLC39A3Q9BRY0 314 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms