RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CATSPERBQ9H7T0 1116 aa16.14■□□□□ 0.18
MBD1-207ENST00000398488 ATP13A1Q9HD20 1204 aa16.14■□□□□ 0.18
MBD1-207ENST00000398488 ZSCAN32Q9NX65 697 aa16.14■□□□□ 0.18
MBD1-207ENST00000398488 USP34Q70CQ2 3546 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 NUP205Q92621 2012 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 C3orf70A6NLC5 250 aaPredicted RBP16.14■□□□□ 0.17
MBD1-207ENST00000398488 BTNL10A8MVZ5 291 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 RASA4BC9J798 803 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 RNF103O00237 685 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 CBX4O00257 560 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 NPC1O15118 1278 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 FGF10O15520 208 aaPredicted RBP16.14■□□□□ 0.17
MBD1-207ENST00000398488 RASA4O43374 803 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 RAMP2O60895 175 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 LILRB5O75023 590 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 SIN3BO75182 1162 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 ZNF821O75541 412 aaPredicted RBP16.14■□□□□ 0.17
MBD1-207ENST00000398488 SRCP12931 536 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 NHLH1Q02575 133 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 CAMK2GQ13555 558 aaPredicted RBP16.14■□□□□ 0.17
MBD1-207ENST00000398488 POLD3Q15054 466 aaPredicted RBP16.14■□□□□ 0.17
MBD1-207ENST00000398488 C9orf64Q5T6V5 341 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 AFMIDQ63HM1 303 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 IL31Q6EBC2 164 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 ARHGAP36Q6ZRI8 547 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 KIAA1328Q86T90 577 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 WDR5BQ86VZ2 330 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 CACUL1Q86Y37 369 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 SH2D3CQ8N5H7 860 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 PCDH19Q8TAB3 1148 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 RLN3Q8WXF3 142 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 PDLIM2Q96JY6 352 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 MRGPRX1Q96LB2 322 aa16.14■□□□□ 0.17
MBD1-207ENST00000398488 ZNF830Q96NB3 372 aaPredicted RBP16.14■□□□□ 0.17
MBD1-207ENST00000398488 POLMQ9NP87 494 aaPredicted RBP16.14■□□□□ 0.17
MBD1-207ENST00000398488 FANCMQ8IYD8 2048 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 GRID2IPA4D2P6 1211 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 H3BRJ5 948 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 AXIN1O15169 862 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 ARHGAP6O43182 974 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 DAPK3O43293 454 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 ATP9BO43861 1147 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 IPO7O95373 1038 aaKnown RBP16.13■□□□□ 0.17
MBD1-207ENST00000398488 HTR7P34969 479 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 KRT83P78385 493 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 SULT2A1Q06520 285 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 KRT81Q14533 505 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 DLG2Q15700 870 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 HNRNPA1L2Q32P51 320 aaKnown RBP16.13■□□□□ 0.17
MBD1-207ENST00000398488 LONP2Q86WA8 852 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 LRRC57Q8N9N7 239 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 KRT35Q92764 455 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 MAGEH1Q9H213 219 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 KCNF1Q9H3M0 494 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 RETREG1Q9H6L5 497 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 LUC7LQ9NQ29 371 aaKnown RBP16.13■□□□□ 0.17
MBD1-207ENST00000398488 LCMT1Q9UIC8 334 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 HS3ST2Q9Y278 367 aa16.13■□□□□ 0.17
MBD1-207ENST00000398488 NYNRINQ9P2P1 1898 aaKnown RBP16.12■□□□□ 0.17
MBD1-207ENST00000398488 MACROD2A1Z1Q3 448 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 J3KR12 359 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 KDELR1P24390 212 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 SLC1A1P43005 524 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 PAPOLAP51003 745 aaKnown RBP16.12■□□□□ 0.17
MBD1-207ENST00000398488 ST8SIA6P61647 398 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 SERINC3Q13530 473 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 C11orf63Q6NUN7 778 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 STK40Q8N2I9 435 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 FAM160A2Q8N612 972 aaPredicted RBP16.12■□□□□ 0.17
MBD1-207ENST00000398488 PQLC3Q8N755 202 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 KDM1BQ8NB78 822 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 KCTD6Q8NC69 237 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 FAM129BQ96TA1 746 aa16.12■□□□□ 0.17
MBD1-207ENST00000398488 C2orf49Q9BVC5 232 aaPredicted RBP16.12■□□□□ 0.17
MBD1-207ENST00000398488 FCF1Q9Y324 198 aaKnown RBP16.12■□□□□ 0.17
MBD1-207ENST00000398488 KDELR3O43731 214 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 SPOPO43791 374 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 SYNCRIPO60506 623 aaKnown RBP16.11■□□□□ 0.17
MBD1-207ENST00000398488 KRT7P08729 469 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 ARL4AP40617 200 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 VASPP50552 380 aaPredicted RBP16.11■□□□□ 0.17
MBD1-207ENST00000398488 METAP1P53582 386 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 ANKRD20A8PQ5CZ79 823 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 Q6ZVU0 165 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 TMPRSS6Q8IU80 811 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 PGBD3Q8N328 593 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 ATP11CQ8NB49 1132 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 CCDC112Q8NEF3 446 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 OR2T3Q8NH03 318 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 VOPP1Q96AW1 172 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 RNF25Q96BH1 459 aaPredicted RBP16.11■□□□□ 0.17
MBD1-207ENST00000398488 FAF2Q96CS3 445 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 PPP1R9BQ96SB3 815 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 CALN1Q9BXU9 219 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 FAM126AQ9BYI3 521 aaPredicted RBP16.11■□□□□ 0.17
MBD1-207ENST00000398488 TNKS2Q9H2K2 1166 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 BCCIPQ9P287 314 aaKnown RBP eCLIP16.11■□□□□ 0.17
MBD1-207ENST00000398488 SUN2Q9UH99 717 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 SLC25A13Q9UJS0 675 aa16.11■□□□□ 0.17
MBD1-207ENST00000398488 PCDHGA2Q9Y5H1 932 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms