RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 DESI2Q9BSY9 194 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 ACE2Q9BYF1 805 aaPredicted RBP21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 PRDM16Q9HAZ2 1276 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 KLHL11Q9NVR0 708 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 DONSONQ9NYP3 566 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 HS3ST2Q9Y278 367 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 INVSQ9Y283 1065 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 MYO15AQ9UKN7 3530 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 GPR179Q6PRD1 2367 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 A0A0A6YYK5 440 aaPredicted RBP21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 ATP9BO43861 1147 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 ZMPSTE24O75844 475 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 MT-CO1P00395 513 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 KRT7P08729 469 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 SRCP12931 536 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 VAV1P15498 845 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 HCAR3P49019 387 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 VAV2P52735 878 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 ARF5P84085 180 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 ACCSLQ4AC99 568 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 ATP13A4Q4VNC1 1196 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 RETSATQ6NUM9 610 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 PRR23BQ6ZRT6 265 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 CEP68Q76N32 757 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 ZNF354CQ86Y25 554 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 UMODL1-AS1Q8N2C9 162 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 ATP11CQ8NB49 1132 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 RLN3Q8WXF3 142 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 CSPG4P5Q96PW8 444 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 EPC1Q9H2F5 836 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 FBRSQ9HAH7 460 aa21.67■■□□□ 1.06
TSPAN4-206ENST00000397408 RASA4BC9J798 803 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 PROB1E7EW31 1015 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 RASA4O43374 803 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 BUB1BO60566 1050 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 YBEYP58557 167 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 SIM2Q14190 667 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 DLG2Q15700 870 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 PARP15Q460N3 678 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 C9orf64Q5T6V5 341 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 KIAA1328Q86T90 577 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 FRS2Q8WU20 508 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 PRCCQ92733 491 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 NKD2Q969F2 451 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 SIPA1Q96FS4 1042 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 HMCESQ96FZ2 354 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 CELF6Q96J87 481 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 SEMA4AQ9H3S1 761 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 HPCAL4Q9UM19 191 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 HYOU1Q9Y4L1 999 aa21.66■■□□□ 1.06
TSPAN4-206ENST00000397408 NYNRINQ9P2P1 1898 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 TARSL2A2RTX5 802 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 K7ERQ8 282 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 DCLK1O15075 740 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 SPOPO43791 374 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 CD48P09326 243 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 P2RY2P41231 377 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 SLC1A1P43005 524 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 ZFYVE27Q5T4F4 411 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 Q6ZVU0 165 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 NPWQ8N729 165 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 PTPRN2Q92932 1015 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 FAM122AQ96E09 287 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 SPACA7Q96KW9 195 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 LACRTQ9GZZ8 138 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 LRRC19Q9H756 370 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 CD93Q9NPY3 652 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 SALL4Q9UJQ4 1053 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 SMG5Q9UPR3 1016 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 ACTL7AQ9Y615 435 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 SPAG17Q6Q759 2223 aa21.65■■□□□ 1.06
TSPAN4-206ENST00000397408 SMAD6O43541 496 aaKnown RBP21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 COMTP21964 271 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 AMPD1P23109 780 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 PLA2G5P39877 138 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 SERPINH1P50454 418 aaKnown RBP21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 ARSEP51690 589 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 CLCN6P51797 869 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 NDST2P52849 883 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 MMRN1Q13201 1228 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 DPYSL3Q14195 570 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 LPAL2Q16609 132 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 MAP7D1Q3KQU3 841 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 ZNF776Q68DI1 518 aaPredicted RBP21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 C22orf39Q6P5X5 142 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 STK40Q8N2I9 435 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 KCTD6Q8NC69 237 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 CCDC112Q8NEF3 446 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 FAM71BQ8TC56 605 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 TSC1Q92574 1164 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 CALN1Q9BXU9 219 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 KLC2Q9H0B6 622 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 RSPH9Q9H1X1 276 aaPredicted RBP21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 GOLPH3Q9H4A6 298 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 RCOR3Q9P2K3 495 aaPredicted RBP21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 MFHAS1Q9Y4C4 1052 aa21.64■■□□□ 1.06
TSPAN4-206ENST00000397408 DMDP11532 3685 aa21.64■■□□□ 1.05
TSPAN4-206ENST00000397408 NUP205Q92621 2012 aa21.64■■□□□ 1.05
TSPAN4-206ENST00000397408 BUB1O43683 1085 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 KDELR3O43731 214 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms