RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ARHGAP36Q6ZRI8 547 aa24.13■■□□□ 1.45
TSPAN4-203ENST00000397397 CREG2Q8IUH2 290 aa24.13■■□□□ 1.45
TSPAN4-203ENST00000397397 SFTPA1Q8IWL2 248 aa24.13■■□□□ 1.45
TSPAN4-203ENST00000397397 FAM118BQ9BPY3 351 aa24.13■■□□□ 1.45
TSPAN4-203ENST00000397397 CIPCQ9C0C6 399 aa24.13■■□□□ 1.45
TSPAN4-203ENST00000397397 KRBA1A5PL33 1030 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 SHISA7A6NL88 538 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 PRRT4C9JH25 899 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 NCAM2O15394 837 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 KDELR3O43731 214 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 SNAP91O60641 907 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 ALADP13716 330 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 CD72P21854 359 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 GARSP41250 739 aaKnown RBP24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 GRSF1Q12849 480 aaKnown RBP eCLIP24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 TMEM196Q5HYL7 178 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 ZNF852Q6ZMS4 543 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 LRRC49Q8IUZ0 686 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 CCNYQ8ND76 341 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 LRRN4Q8WUT4 740 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 TTC17Q96AE7 1141 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 SHDQ96IW2 340 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 OLFM3Q96PB7 478 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 SP110Q9HB58 689 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 ELOVL2Q9NXB9 296 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 IPO11Q9UI26 975 aaKnown RBP24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 VPS51Q9UID3 782 aa24.12■■□□□ 1.45
TSPAN4-203ENST00000397397 A0A0A0MRY4 1105 aa24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 PPP1R12AO14974 1030 aaPredicted RBP24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 DRD1P21728 446 aa24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 PAFAH1B1P43034 410 aa24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 EIF3EP60228 445 aaKnown RBP24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 SULT2A1Q06520 285 aa24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 SIX1Q15475 284 aaPredicted RBP24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 FSTL4Q6MZW2 842 aa24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 ZC3H18Q86VM9 953 aaKnown RBP24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 SIX5Q8N196 739 aa24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 ACDQ96AP0 544 aa24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 RNF14Q9UBS8 474 aa24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 NDRG2Q9UN36 371 aaKnown RBP24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 SHROOM3Q8TF72 1996 aa24.11■■□□□ 1.45
TSPAN4-203ENST00000397397 H7C0C1 242 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 J3KR12 359 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 MCF2LO15068 1137 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 TIMM44O43615 452 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 ZMPSTE24O75844 475 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 EGFP01133 1207 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 ATP5BP06576 529 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 CTSOP43234 321 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 TNFRSF4P43489 277 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 ATP5OP48047 213 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 EIF4HQ15056 248 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 DNTTIP2Q5QJE6 756 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 B4GALNT4Q76KP1 1039 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 C1orf54Q8WWF1 131 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 SORCS1Q8WY21 1168 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 HDAC11Q96DB2 347 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 LGMNQ99538 433 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 AP1M1Q9BXS5 423 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 MAFKO60675 156 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 PRAMEF11O60813 436 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 ASLP04424 464 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 STARD6P59095 220 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 ARF5P84085 180 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 ECT2LQ008S8 904 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 IL10RBQ08334 325 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 PPIDQ08752 370 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 AP1B1Q10567 949 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 XRCC4Q13426 336 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 LINGO4Q6UY18 593 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 LEKR1Q6ZMV7 388 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 CYB5D2Q8WUJ1 264 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 UCMAQ8WVF2 138 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 TFB1MQ8WVM0 346 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 ATG4AQ8WYN0 398 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 TSGA13Q96PP4 275 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 C1QTNF1Q9BXJ1 281 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 FRMD8P1Q9BZ68 369 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 BRD8Q9H0E9 1235 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 SLC25A13Q9UJS0 675 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 CDC23Q9UJX2 597 aa24.1■■□□□ 1.45
TSPAN4-203ENST00000397397 ZSCAN5CA6NGD5 496 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-203ENST00000397397 HACD1B0YJ81 288 aa24.09■■□□□ 1.45
TSPAN4-203ENST00000397397 K7EQS6 105 aa24.09■■□□□ 1.45
TSPAN4-203ENST00000397397 KRIT1O00522 736 aa24.09■■□□□ 1.45
TSPAN4-203ENST00000397397 CCNCP24863 283 aa24.09■■□□□ 1.45
TSPAN4-203ENST00000397397 RETSATQ6NUM9 610 aa24.09■■□□□ 1.45
TSPAN4-203ENST00000397397 CCDC13Q8IYE1 715 aa24.09■■□□□ 1.45
TSPAN4-203ENST00000397397 EZH1Q92800 747 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-203ENST00000397397 ERVW-1Q9UQF0 538 aa24.09■■□□□ 1.45
TSPAN4-203ENST00000397397 MRPS17Q9Y2R5 130 aaKnown RBP24.09■■□□□ 1.45
TSPAN4-203ENST00000397397 PDE2AO00408 941 aaPredicted RBP24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 DLDP09622 509 aaKnown RBP24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 RBP3P10745 1247 aa24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 STK19P49842 368 aaPredicted RBP24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 SEC13P55735 322 aa24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 CCNG2Q16589 344 aa24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 TIGD7Q6NT04 549 aaPredicted RBP24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 DARS2Q6PI48 645 aaKnown RBP24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 PRELID2Q8N945 189 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms