RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SMPD4Q9NXE4 827 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 ZMYM5Q9UJ78 669 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 R3HDM2Q9Y2K5 976 aaKnown RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 SNX10Q9Y5X0 201 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 HS3ST4Q9Y661 456 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 LRIG2O94898 1065 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 KCNK5O95279 499 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 RHOXF2BP0C7M4 288 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 AMPD1P23109 780 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 COILP38432 576 aaPredicted RBP13.6□□□□□ -0.23
SEC13-209ENST00000397117 GGCXP38435 758 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 FNTAP49354 379 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 OTUD4Q01804 1114 aaKnown RBP13.6□□□□□ -0.23
SEC13-209ENST00000397117 GRSF1Q12849 480 aaKnown RBP eCLIP13.6□□□□□ -0.23
SEC13-209ENST00000397117 RUNX3Q13761 415 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 DPYSQ14117 519 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 ERCC6LQ2NKX8 1250 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 PIK3R6Q5UE93 754 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 CCDC137Q6PK04 289 aaKnown RBP13.6□□□□□ -0.23
SEC13-209ENST00000397117 CAMKK1Q8N5S9 505 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 PLD5Q8N7P1 536 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 TBC1D31Q96DN5 1066 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 FAM118BQ9BPY3 351 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 RHOXF2Q9BQY4 288 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 SMOC1Q9H4F8 434 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 FBRSL1Q9HCM7 1045 aaKnown RBP13.6□□□□□ -0.23
SEC13-209ENST00000397117 POLR3BQ9NW08 1133 aaPredicted RBP13.6□□□□□ -0.23
SEC13-209ENST00000397117 AMACRQ9UHK6 382 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 FEZ2Q9UHY8 353 aaPredicted RBP13.6□□□□□ -0.23
SEC13-209ENST00000397117 XPO7Q9UIA9 1087 aaKnown RBP13.6□□□□□ -0.23
SEC13-209ENST00000397117 SLC8A2Q9UPR5 921 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 HEY1Q9Y5J3 304 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 CPQQ9Y646 472 aa13.6□□□□□ -0.23
SEC13-209ENST00000397117 KIAA1549LQ6ZVL6 1849 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 E9PAM4 449 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 MCF2LO15068 1137 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 LIASO43766 372 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 STC2O76061 302 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 OLFM2O95897 454 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 EGFP01133 1207 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 CORO1AP31146 461 aaKnown RBP13.59□□□□□ -0.23
SEC13-209ENST00000397117 AVPR1AP37288 418 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 NR2C2P49116 596 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 DR1Q01658 176 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 NRG1Q02297 640 aaPredicted RBP13.59□□□□□ -0.23
SEC13-209ENST00000397117 BYSLQ13895 437 aaKnown RBP13.59□□□□□ -0.23
SEC13-209ENST00000397117 DHX34Q14147 1143 aaKnown RBP13.59□□□□□ -0.23
SEC13-209ENST00000397117 PLK5Q496M5 336 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 MS4A13Q5J8X5 152 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 TMCO3Q6UWJ1 677 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 BZW1Q7L1Q6 419 aaKnown RBP13.59□□□□□ -0.23
SEC13-209ENST00000397117 CHSY1Q86X52 802 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 DENND1CQ8IV53 801 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 ACTL9Q8TC94 416 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 GRK7Q8WTQ7 553 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 USP13Q92995 863 aaPredicted RBP13.59□□□□□ -0.23
SEC13-209ENST00000397117 CCDC114Q96M63 670 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 SLC22A12Q96S37 553 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 LRRC1Q9BTT6 524 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 DUSP15Q9H1R2 295 aaPredicted RBP13.59□□□□□ -0.23
SEC13-209ENST00000397117 CATSPERBQ9H7T0 1116 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 VPS45Q9NRW7 570 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 SAE1Q9UBE0 346 aaPredicted RBP13.59□□□□□ -0.23
SEC13-209ENST00000397117 CCL26Q9Y258 94 aa13.59□□□□□ -0.23
SEC13-209ENST00000397117 SOBPA7XYQ1 873 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 FGF10O15520 208 aaPredicted RBP13.58□□□□□ -0.24
SEC13-209ENST00000397117 ACSL4O60488 711 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 PECAM1P16284 738 aaPredicted RBP13.58□□□□□ -0.24
SEC13-209ENST00000397117 ERCC2P18074 760 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 MPLP40238 635 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 GALK1P51570 392 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 EIF3EP60228 445 aaKnown RBP13.58□□□□□ -0.24
SEC13-209ENST00000397117 SLC7A9P82251 487 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 AUHQ13825 339 aaKnown RBP13.58□□□□□ -0.24
SEC13-209ENST00000397117 NAA30Q147X3 362 aaPredicted RBP13.58□□□□□ -0.24
SEC13-209ENST00000397117 RAP1GAP2Q684P5 730 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 TRIM68Q6AZZ1 485 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 TTC27Q6P3X3 843 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 NPNTQ6UXI9 565 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 TTC16Q8NEE8 873 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 ATL2Q8NHH9 583 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 RIN3Q8TB24 985 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 AZIN2Q96A70 460 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 DDX50Q9BQ39 737 aaKnown RBP13.58□□□□□ -0.24
SEC13-209ENST00000397117 EBF3Q9H4W6 596 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 PCYOX1Q9UHG3 505 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 LSM7Q9UK45 103 aaKnown RBP13.58□□□□□ -0.24
SEC13-209ENST00000397117 DNPEPQ9ULA0 475 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 VANGL2Q9ULK5 521 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 ZNF148Q9UQR1 794 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 ANAPC1Q9H1A4 1944 aa13.58□□□□□ -0.24
SEC13-209ENST00000397117 THADAQ6YHU6 1953 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 F5H5T6 163 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 RAD51CO43502 376 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 RNF40O75150 1001 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 ECEL1O95672 775 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 ARSAP15289 507 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 SERPINB6P35237 376 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 KCNJ1P48048 391 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 MRPS25P82663 173 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms