RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ICAM3P32942 547 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 NDST2P52849 883 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 NUP107P57740 925 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 GJC2Q5T442 439 aaPredicted RBP24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 ITPRIPL1Q6GPH6 555 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 ELMSAN1Q6PJG2 1045 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 NCCRP1Q6ZVX7 275 aaPredicted RBP24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 KHSRPQ92945 711 aaKnown RBP eCLIP24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 RANBP9Q96S59 729 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 SLC4A5Q9BY07 1137 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 SEMA6AQ9H2E6 1030 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 CNOT11Q9UKZ1 510 aaKnown RBP24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 ADAMTS5Q9UNA0 930 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 A0A087WZ62 844 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 BCAS2O75934 225 aaPredicted RBP24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 TCN1P20061 433 aaPredicted RBP24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 DPP6P42658 865 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 OAZ1P54368 228 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 SLC10A6Q3KNW5 377 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 SPNS2Q8IVW8 549 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 AGAP2Q99490 1192 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 FDXACB1Q9BRP7 624 aaPredicted RBP24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 NT5C1AQ9BXI3 368 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 DPEP3Q9H4B8 488 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 COQ10BQ9H8M1 238 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 KANSL1LA0AUZ9 987 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 NUMBP49757 651 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 TXNL4AP83876 142 aaKnown RBP24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 NIPAL4Q0D2K0 466 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 INSCQ1MX18 579 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 ANKDD1AQ495B1 522 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 CYS1Q717R9 158 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 ILDR2Q71H61 639 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 FBXO16Q8IX29 292 aaPredicted RBP24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 TDRD5Q8NAT2 981 aaKnown RBP24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 RP9Q8TA86 221 aaKnown RBP24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 CXorf38Q8TB03 319 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 CDKL2Q92772 493 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 CSPG4P5Q96PW8 444 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 HESX1Q9UBX0 185 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 MYRFQ9Y2G1 1151 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 SQORQ9Y6N5 450 aa24.45■■□□□ 1.5
CSNK1E-203ENST00000396832 MCM3APO60318 1980 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 H3BNH8 94 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 MFSD11O43934 449 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 TFPTP0C1Z6 253 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 MTA1Q13330 715 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 TMEM132DQ14C87 1099 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 HTR3CQ8WXA8 447 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 FZD8Q9H461 694 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 ALDH1A2O94788 518 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 CHRNGP07510 517 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 GLRA4Q5JXX5 417 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 IL23RQ5VWK5 629 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 NCBP2-AS2Q69YL0 99 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 METTL7BQ6UX53 244 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 ZSCAN18Q8TBC5 510 aaPredicted RBP24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 SPATA33Q96N06 139 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 ZNF670Q9BS34 389 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 WDR41Q9HAD4 459 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 NME7Q9Y5B8 376 aa24.44■■□□□ 1.5
CSNK1E-203ENST00000396832 KCNK1O00180 336 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 LTFP02788 710 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 P4HA1P13674 534 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 CCDC130P13994 396 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 CCR3P51677 355 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 SLC6A3Q01959 620 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 SOWAHAQ2M3V2 549 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 LCLAT1Q6UWP7 414 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 PGAM4Q8N0Y7 254 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 FAM156AQ8NDB6 213 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 PPP1R13LQ8WUF5 828 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 APOL2Q9BQE5 337 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 TMEM79Q9BSE2 394 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 SNX15Q9NRS6 342 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 OLAHQ9NV23 265 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 CBFA2T3O75081 653 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 TPSB2P20231 275 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 TPSAB1Q15661 275 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 KRT80Q6KB66 452 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 ACVR1CQ8NER5 493 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 ARNTL2Q8WYA1 636 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 ATP6V1E2Q96A05 226 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 CNDP1Q96KN2 507 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 C2orf40Q9H1Z8 148 aa24.43■■□□□ 1.5
CSNK1E-203ENST00000396832 RNF103O00237 685 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 GCATO75600 419 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 CDH15P55291 814 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 TMEM198Q66K66 360 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 DCLK2Q8N568 766 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 LZTR1Q8N653 840 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 SLC35B4Q969S0 331 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 KIF12Q96FN5 646 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 ZNF597Q96LX8 424 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 GPR20Q99678 358 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 MTMR10Q9NXD2 777 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 EBF1Q9UH73 591 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 ACOT8O14734 319 aa24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 FOXD2O60548 495 aaPredicted RBP24.42■■□□□ 1.5
CSNK1E-203ENST00000396832 GMPSP49915 693 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms