RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 GCNAQ96QF7 691 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 CDCA3Q99618 268 aaPredicted RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 DDX50Q9BQ39 737 aaKnown RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 TMEM109Q9BVC6 243 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 FRMD8Q9BZ67 464 aaPredicted RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 SMG9Q9H0W8 520 aaKnown RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 CFAP97Q9P2B7 532 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 ZNF510Q9Y2H8 683 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 SPTBN5Q9NRC6 3674 aaKnown RBP12.99□□□□□ -0.33
TRIM39-204ENST00000396548 ARHGAP42A6NI28 874 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 RFXAPO00287 272 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 JCHAINP01591 159 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 HOXD9P28356 352 aaPredicted RBP12.99□□□□□ -0.33
TRIM39-204ENST00000396548 ARL4CP56559 192 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 CDK16Q00536 496 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 POLD3Q15054 466 aaPredicted RBP12.99□□□□□ -0.33
TRIM39-204ENST00000396548 SYCP2LQ5T4T6 812 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 ZNF697Q5TEC3 545 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 SETD3Q86TU7 594 aaPredicted RBP12.99□□□□□ -0.33
TRIM39-204ENST00000396548 TADA1Q96BN2 335 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 FERMT1Q9BQL6 677 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 ACE2Q9BYF1 805 aaPredicted RBP12.99□□□□□ -0.33
TRIM39-204ENST00000396548 SLC28A3Q9HAS3 691 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 OGFRQ9NZT2 677 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 A0A0D9SEW6 157 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 A0A1B0GVM2 712 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 TCAF2A6NFQ2 919 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 PRAMEF11O60813 436 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 RAMP2O60895 175 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 AVILO75366 819 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 GLP2RO95838 553 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 CKMP06732 381 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 GRIA1P42261 906 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 GPX6P59796 221 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 IL10RBQ08334 325 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 KYNUQ16719 465 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 CENPUQ71F23 418 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 PID1Q7Z2X4 250 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 BBS7Q8IWZ6 715 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 MAGEH1Q9H213 219 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 SAYSD1Q9NPB0 183 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 OR51B4Q9Y5P0 310 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 XIRP2A4UGR9 3374 aa12.99□□□□□ -0.33
TRIM39-204ENST00000396548 ILVBLA1L0T0 632 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 APRTP07741 180 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 ABHD2P08910 425 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 CEBPBP17676 345 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 NFKB1P19838 968 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 HNRNPDQ14103 355 aaKnown RBP12.98□□□□□ -0.33
TRIM39-204ENST00000396548 ALG14Q96F25 216 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 OXNAD1Q96HP4 312 aaPredicted RBP12.98□□□□□ -0.33
TRIM39-204ENST00000396548 LMLNQ96KR4 655 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 MYO18AQ92614 2054 aaKnown RBP12.98□□□□□ -0.33
TRIM39-204ENST00000396548 E2F8A0AVK6 867 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 TSPAN3O60637 253 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 HLA-DQB2P05538 268 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 MLNP12872 115 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 GNA12Q03113 381 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 PDIA2Q13087 525 aaKnown RBP12.98□□□□□ -0.33
TRIM39-204ENST00000396548 ZNF77Q15935 545 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 ZNF783Q6ZMS7 281 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 SIGLEC10Q96LC7 697 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 AGAP3Q96P47 875 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 FCRL5Q96RD9 977 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 KLHL8Q9P2G9 620 aaPredicted RBP12.98□□□□□ -0.33
TRIM39-204ENST00000396548 MYLKQ15746 1914 aa12.98□□□□□ -0.33
TRIM39-204ENST00000396548 TCEA3O75764 348 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 PRAMEF12O95522 483 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 AP2A1O95782 977 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 USP4Q13107 963 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 IHHQ14623 411 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 FSCBQ5H9T9 825 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 MPP7Q5T2T1 576 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 LRRC8BQ6P9F7 803 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 PGBD5Q8N414 524 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 C12orf76Q8N812 135 aaPredicted RBP12.97□□□□□ -0.33
TRIM39-204ENST00000396548 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
TRIM39-204ENST00000396548 ITFG1Q8TB96 612 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 SH3RF2Q8TEC5 729 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 TIFAQ96CG3 184 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 C9orf72Q96LT7 481 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 SFXN1Q9H9B4 322 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 MED4Q9NPJ6 270 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 MYO7AQ13402 2215 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 KDELR3O43731 214 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 HYAL1Q12794 435 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 TTMPQ5BVD1 217 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 C6orf118Q5T5N4 469 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 PPP1R21Q6ZMI0 780 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 OTOP3Q7RTS5 596 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 DENND4AQ7Z401 1863 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 ZBTB9Q96C00 473 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 TMBIM4Q9HC24 238 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 GLOD4Q9HC38 313 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 RSPH14Q9UHP6 348 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 ZMYM5Q9UJ78 669 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 SCAMP3O14828 347 aaKnown RBP12.97□□□□□ -0.33
TRIM39-204ENST00000396548 CD160O95971 181 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 C1QAP02745 245 aa12.97□□□□□ -0.33
TRIM39-204ENST00000396548 MMP2P08253 660 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms