RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 SPAG17Q6Q759 2223 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 EDDM13A0A1B0GTR0 161 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 ZBTB24O43167 697 aaPredicted RBP18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 SIN3BO75182 1162 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 MT-CO1P00395 513 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 SRCP12931 536 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 GLDCP23378 1020 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 ARSEP51690 589 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 YBEYP58557 167 aaPredicted RBP18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 TAS2R40P59535 323 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 ARF5P84085 180 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 MAP7D1Q3KQU3 841 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 POLNQ7Z5Q5 900 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 TMPRSS6Q8IU80 811 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 TSC1Q92574 1164 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 SPON2Q9BUD6 331 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 KLC2Q9H0B6 622 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 RSPH9Q9H1X1 276 aaPredicted RBP18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 PCDH18Q9HCL0 1135 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 DONSONQ9NYP3 566 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 TFR2Q9UP52 801 aa18.19■□□□□ 0.5
TNFSF13-204ENST00000396542 RCCD1A6NED2 376 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 GOLGA6L3A6NEY3 463 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 H3BRJ5 948 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 CBX4O00257 560 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 IPO7O95373 1038 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 ERCC2P18074 760 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 CLCN6P51797 869 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 NDST2P52849 883 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 SLC20A2Q08357 652 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 SIM2Q14190 667 aaPredicted RBP18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 POLD3Q15054 466 aaPredicted RBP18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 PARP15Q460N3 678 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 AFMIDQ63HM1 303 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 IL31Q6EBC2 164 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 RETSATQ6NUM9 610 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 ZC3H10Q96K80 434 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 LRRC19Q9H756 370 aa18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 USP36Q9P275 1121 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 RCOR3Q9P2K3 495 aaPredicted RBP18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 SMG5Q9UPR3 1016 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-204ENST00000396542 NUP205Q92621 2012 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 PRR23AA6NEV1 266 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 TMEM110-MUSTN1A8MSY1 372 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 BTNL10A8MVZ5 291 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 K7ERQ8 282 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 PJA2O43164 708 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 DAPK3O43293 454 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 KDELR3O43731 214 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 ZNF217O75362 1048 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 CD160O95971 181 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 IGLV3-19P01714 112 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 LMNAP02545 664 aaKnown RBP18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 KRT7P08729 469 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 VAV1P15498 845 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 IL4RP24394 825 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 ARL4AP40617 200 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 SLC1A1P43005 524 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 SSR1P43307 286 aaKnown RBP18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 SERPINH1P50454 418 aaKnown RBP18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 RPS14P62263 151 aaKnown RBP18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 ZBTB16Q05516 673 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 BYSLQ13895 437 aaKnown RBP18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 DLG2Q15700 870 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 ATP13A4Q4VNC1 1196 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 LINGO4Q6UY18 593 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 C11orf74Q86VG3 221 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 ATP11CQ8NB49 1132 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 ACRBPQ8NEB7 543 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 RLN3Q8WXF3 142 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 PRCCQ92733 491 aaPredicted RBP18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 SIPA1Q96FS4 1042 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 CSPG4P5Q96PW8 444 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 FAM129BQ96TA1 746 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 ITM2CQ9NQX7 267 aa18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 ZFHX2Q9C0A1 2572 aaPredicted RBP18.17■□□□□ 0.5
TNFSF13-204ENST00000396542 IGHV1OR15-9A0A0B4J2B8 117 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 RASA4BC9J798 803 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 DCLK1O15075 740 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 RASA4O43374 803 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 SMAD6O43541 496 aaKnown RBP18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 VAV2P52735 878 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 CDH6P55285 790 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 SERINC3Q13530 473 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 ELAVL3Q14576 367 aaKnown RBP18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 LRRC38Q5VT99 294 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 KIAA1324Q6UXG2 1013 aaKnown RBP18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 CEP68Q76N32 757 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 ASCL5Q7RTU5 278 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 NPWQ8N729 165 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 FRMD1Q8N878 549 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 HMCESQ96FZ2 354 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 SPACA7Q96KW9 195 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 CEP44Q9C0F1 390 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 DUSP15Q9H1R2 295 aaPredicted RBP18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 CD93Q9NPY3 652 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 MBD1Q9UIS9 605 aaPredicted RBP18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 SALL4Q9UJQ4 1053 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 INVSQ9Y283 1065 aa18.16■□□□□ 0.5
TNFSF13-204ENST00000396542 TNRC6BQ9UPQ9 1833 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms