RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 DCTN4Q9UJW0 460 aa16.46■□□□□ 0.22
SNX6-202ENST00000396526 SLC12A8A0AV02 714 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 GPR15P49685 360 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 CSE1LP55060 971 aaKnown RBP16.45■□□□□ 0.22
SNX6-202ENST00000396526 PCID2Q5JVF3 399 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 PDPK2PQ6A1A2 396 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 NLRP9Q7RTR0 991 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 STRA8Q7Z7C7 330 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 ARHGAP12Q8IWW6 846 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.45■□□□□ 0.22
SNX6-202ENST00000396526 PPHLN1Q8NEY8 458 aaKnown RBP16.45■□□□□ 0.22
SNX6-202ENST00000396526 ERP27Q96DN0 273 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 RMDN2Q96LZ7 410 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 SP110Q9HB58 689 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 IL37Q9NZH6 218 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 MPP6Q9NZW5 540 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 SLC27A5Q9Y2P5 690 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 A0A0G2JND7 137 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 MTMR11A4FU01 709 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 MAFKO60675 156 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 IL1BP01584 269 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 GALTP07902 379 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 TUFMP49411 452 aaKnown RBP16.45■□□□□ 0.22
SNX6-202ENST00000396526 SERPINB8P50452 374 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 CERCAMQ5T4B2 595 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 FBXW10Q5XX13 1052 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 POTEHQ6S545 545 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 OTOP3Q7RTS5 596 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 KCNMB4Q86W47 210 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 PPARGC1AQ9UBK2 798 aaKnown RBP16.45■□□□□ 0.22
SNX6-202ENST00000396526 MAGED2Q9UNF1 606 aaPredicted RBP16.45■□□□□ 0.22
SNX6-202ENST00000396526 NUP205Q92621 2012 aa16.45■□□□□ 0.22
SNX6-202ENST00000396526 PAPOLAP51003 745 aaKnown RBP16.44■□□□□ 0.22
SNX6-202ENST00000396526 MPP3Q13368 585 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 HNRNPDQ14103 355 aaKnown RBP16.44■□□□□ 0.22
SNX6-202ENST00000396526 GALNTL6Q49A17 601 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 UNC5BQ8IZJ1 945 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 CNTD1Q8N815 330 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 PTCD2Q8WV60 388 aaKnown RBP16.44■□□□□ 0.22
SNX6-202ENST00000396526 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.44■□□□□ 0.22
SNX6-202ENST00000396526 HAPLN1P10915 354 aaPredicted RBP16.44■□□□□ 0.22
SNX6-202ENST00000396526 ITKQ08881 620 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 STX3Q13277 289 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 CHI3L2Q15782 390 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 TAF12Q16514 161 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 UMODL1-AS1Q8N2C9 162 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 CEP295NLQ96MC4 621 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 ZFP69BQ9UJL9 534 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 MID2Q9UJV3 735 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 FAM92AA1XBS5 289 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 TPP1O14773 563 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 HNRNPCL1O60812 293 aaKnown RBP16.44■□□□□ 0.22
SNX6-202ENST00000396526 TPH1P17752 444 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 DUSP4Q13115 394 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 HSP90AA5PQ58FG0 334 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 SH3TC2Q8TF17 1288 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 C10orf82Q8WW14 230 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 DEFB118Q96PH6 123 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 RAB3IPQ96QF0 476 aaPredicted RBP16.44■□□□□ 0.22
SNX6-202ENST00000396526 HIPK3Q9H422 1215 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 KLC4Q9NSK0 619 aa16.44■□□□□ 0.22
SNX6-202ENST00000396526 CACNG3O60359 315 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 BPGMP07738 259 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 OVGP1Q12889 678 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 USP41Q3LFD5 358 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 MARC1Q5VT66 337 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 ARMC3Q5W041 872 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 CDHR3Q6ZTQ4 885 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 TBC1D1Q86TI0 1168 aaPredicted RBP16.43■□□□□ 0.22
SNX6-202ENST00000396526 RPRD1AQ96P16 312 aaPredicted RBP16.43■□□□□ 0.22
SNX6-202ENST00000396526 OSER1Q9NX31 292 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 NT5C1B-RDH14C9J2C7 533 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 MPOP05164 745 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 USP46P62068 366 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 RING1Q06587 406 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 SPDYAQ5MJ70 313 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 C14orf80Q86SX3 495 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 GPR152Q8TDT2 470 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 MFSD3Q96ES6 412 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 C7orf26Q96N11 449 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 RBBP8Q99708 897 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 FICDQ9BVA6 458 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 PRKD2Q9BZL6 878 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 UNC93B1Q9H1C4 597 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 MARCH5Q9NX47 278 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 TLK1Q9UKI8 766 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 PMPCBO75439 489 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 PGFP49763 221 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 LIMK2P53671 638 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 THOC5Q13769 683 aaKnown RBP16.43■□□□□ 0.22
SNX6-202ENST00000396526 PSMD5Q16401 504 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 SPRED3Q2MJR0 410 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 CCDC117Q8IWD4 279 aaPredicted RBP16.43■□□□□ 0.22
SNX6-202ENST00000396526 BBS5Q8N3I7 341 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 ZNF276Q8N554 614 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 PDZD8Q8NEN9 1154 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 PPP4R1Q8TF05 950 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 KIFC1Q9BW19 673 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 UBE2OQ9C0C9 1292 aaKnown RBP16.43■□□□□ 0.22
SNX6-202ENST00000396526 CHRAC1Q9NRG0 131 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms