RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ZDHHC15Q96MV8 337 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 EXOSC4Q9NPD3 245 aaKnown RBP8.58□□□□□ -1.04
NDE1-202ENST00000396355 ACP6Q9NPH0 428 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 FANCFQ9NPI8 374 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 IGLV3-22A0A075B6J6 115 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 KANSL1LA0AUZ9 987 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 VWA5AO00534 786 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 HDAC3O15379 428 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 TGFB1I1O43294 461 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 BANF1O75531 89 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 CLIC3O95833 236 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 NDUFB10O96000 172 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 T-ENOLP0DO92 83 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 CYP2C8P10632 490 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 SREBF1P36956 1147 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 CCT8P50990 548 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 AP3M2P53677 418 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 MFAP3P55082 362 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 JAM2P57087 298 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 BMPR2Q13873 1038 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 COG2Q14746 738 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 PPP4R4Q6NUP7 873 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 TATDN1Q6P1N9 297 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 TTC23LQ6PF05 361 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 TICAM1Q8IUC6 712 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 SLAIN1Q8ND83 568 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 FBXO27Q8NI29 283 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 ACTRT2Q8TDY3 377 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 FAR1Q8WVX9 515 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 VPS33AQ96AX1 596 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 MTERF3Q96E29 417 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 NARS2Q96I59 477 aaKnown RBP8.58□□□□□ -1.04
NDE1-202ENST00000396355 ZNF560Q96MR9 790 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 WDR18Q9BV38 432 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 RAB20Q9NX57 234 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 WRAP73Q9P2S5 460 aaPredicted RBP8.58□□□□□ -1.04
NDE1-202ENST00000396355 WBP11Q9Y2W2 641 aaKnown RBP8.58□□□□□ -1.04
NDE1-202ENST00000396355 MIF4GDA9UHW6 222 aaKnown RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 TRIM49D1C9J1S8 452 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 BTBD19C9JJ37 291 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 ANKRD63C9JTQ0 380 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 E7ENX8 843 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 TNNC2P02585 160 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 S100A9P06702 114 aaKnown RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 ETV3P41162 512 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 CDK9P50750 372 aaKnown RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 SLC12A2P55011 1212 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 SLC12A1Q13621 1099 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 DSC3Q14574 896 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 SIGIRRQ6IA17 410 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 AMIGO1Q86WK6 493 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 CCDC60Q8IWA6 550 aaPredicted RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 THNSL1Q8IYQ7 743 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 CCNYL1Q8N7R7 359 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 FIZ1Q96SL8 496 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 ADAM7Q9H2U9 754 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 XPNPEP1Q9NQW7 623 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 NYAP2Q9P242 653 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 BRCA1P38398 1863 aaKnown RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 DFFAO00273 331 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 SORBS2O94875 1100 aaKnown RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 ALOX5P09917 674 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 ELNP15502 786 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 UQCRC1P31930 480 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 CSTF3Q12996 717 aaKnown RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 AP3B2Q13367 1082 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 EFR3AQ14156 821 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 MORF4L2Q15014 288 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 HIF1AQ16665 826 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 C10orf62Q5T681 223 aaPredicted RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 MOXD1Q6UVY6 613 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 PPP4R3CPQ6ZMV5 832 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 BNC2Q6ZN30 1099 aaPredicted RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.57□□□□□ -1.04
NDE1-202ENST00000396355 SLFN12Q8IYM2 578 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 OR7A2PQ8NGA2 310 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 ZNF486Q96H40 463 aaPredicted RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 ARHGAP39Q9C0H5 1083 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 PIF1Q9H611 641 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 COG4Q9H9E3 785 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 MOV10Q9HCE1 1003 aaKnown RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 TRMT13Q9NUP7 481 aaKnown RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 COPG2Q9UBF2 871 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 FETUBQ9UGM5 382 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 IGSF9BQ9UPX0 1349 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 TK2O00142 265 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 EYA4O95677 639 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 ZNF23P17027 643 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 CRABP2P29373 138 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 CCND2P30279 289 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 AARS2Q5JTZ9 985 aaKnown RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 ATAD3BQ5T9A4 648 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 CRTC1Q6UUV9 634 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 FRMD5Q7Z6J6 570 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 SLC13A5Q86YT5 568 aaPredicted RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 OR8H3Q8N146 312 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 PCDH20Q8N6Y1 951 aaKnown RBP8.57□□□□□ -1.04
NDE1-202ENST00000396355 OR5H6Q8NGV6 325 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 DCAF4Q8WV16 495 aa8.57□□□□□ -1.04
NDE1-202ENST00000396355 C10orf82Q8WW14 230 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms