RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 SYCP1Q15431 976 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 SLC25A52Q3SY17 297 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 POM121L1PQ3SYA9 428 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 CT47A1Q5JQC4 288 aaPredicted RBP16.79■□□□□ 0.28
DDR1-229ENST00000396342 PRAMEF14Q5SWL7 426 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 CXorf57Q6NSI4 855 aaKnown RBP16.79■□□□□ 0.28
DDR1-229ENST00000396342 FAM71AQ8IYT1 594 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 WDTC1Q8N5D0 677 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 SH2D3CQ8N5H7 860 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 FRS2Q8WU20 508 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 SPON2Q9BUD6 331 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 PPM1HQ9ULR3 514 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 TBC1D30Q9Y2I9 924 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 AK5Q9Y6K8 562 aa16.79■□□□□ 0.28
DDR1-229ENST00000396342 TRABD2BA6NFA1 517 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 LATO43561 262 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 SRGAP2O75044 1071 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 PCDH8O95206 1070 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 EPHA8P29322 1005 aaPredicted RBP16.78■□□□□ 0.28
DDR1-229ENST00000396342 CHRNA3P32297 505 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 CXCR3P49682 368 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 DNA2P51530 1060 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 GEMIN4P57678 1058 aaKnown RBP16.78■□□□□ 0.28
DDR1-229ENST00000396342 DAB2P98082 770 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 CNTN1Q12860 1018 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 SMAD1Q15797 465 aaKnown RBP16.78■□□□□ 0.28
DDR1-229ENST00000396342 PTPN20Q4JDL3 420 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 FKBP15Q5T1M5 1219 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 ZNF783Q6ZMS7 281 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 LRRC69Q6ZNQ3 347 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 DCAF4L2Q8NA75 395 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 TMIEQ8NEW7 156 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 FAM174AQ8TBP5 190 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 MDM1Q8TC05 714 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 SAP25Q8TEE9 199 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 C1orf74Q96LT6 269 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 PLCB1Q9NQ66 1216 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 DKK4Q9UBT3 224 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 RALYQ9UKM9 306 aaKnown RBP16.78■□□□□ 0.28
DDR1-229ENST00000396342 HPCAL4Q9UM19 191 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 HS3ST2Q9Y278 367 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 IGF2RP11717 2491 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 CEP192Q8TEP8 1941 aa16.78■□□□□ 0.28
DDR1-229ENST00000396342 CKAP5Q14008 2032 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 ANKRD62A6NC57 917 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 GOLGA8SH3BPF8 625 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 CBX4O00257 560 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 VAV1P15498 845 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 CYP11B1P15538 503 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 EEF1GP26641 437 aaKnown RBP16.77■□□□□ 0.28
DDR1-229ENST00000396342 DRD3P35462 400 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 RXRGP48443 463 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 APBA1Q02410 837 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 CYP4F3Q08477 520 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 EIF4EBP2Q13542 120 aaPredicted RBP16.77■□□□□ 0.28
DDR1-229ENST00000396342 KCNJ12Q14500 433 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 KCNT1Q5JUK3 1230 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 TAF3Q5VWG9 929 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 FBXL19Q6PCT2 694 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 C19orf48Q6RUI8 117 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 ZSCAN30Q86W11 494 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 PGAP3Q96FM1 320 aaPredicted RBP16.77■□□□□ 0.28
DDR1-229ENST00000396342 PCMTD1Q96MG8 357 aaPredicted RBP16.77■□□□□ 0.28
DDR1-229ENST00000396342 HAPLN3Q96S86 360 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 NPY6RQ99463 290 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 ORAI3Q9BRQ5 295 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 ZYG11BQ9C0D3 744 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 NUP62CLQ9H1M0 184 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 CLSTN2Q9H4D0 955 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 PIGVQ9NUD9 493 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 ARHGEF38Q9NXL2 777 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 IL36AQ9UHA7 158 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 IPO11Q9UI26 975 aaKnown RBP16.77■□□□□ 0.28
DDR1-229ENST00000396342 RAXQ9Y2V3 346 aa16.77■□□□□ 0.28
DDR1-229ENST00000396342 ADAMTS9Q9P2N4 1935 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 FAM208BQ5VWN6 2430 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 A0A1W2PR77 199 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 NEMP2A6NFY4 417 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 NEMP1O14524 444 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 SLC31A1O15431 190 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 RRP8O43159 456 aaKnown RBP16.76■□□□□ 0.27
DDR1-229ENST00000396342 WNT1P04628 370 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 CKMT2P17540 419 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 CLCN1P35523 988 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 GGCXP38435 758 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 PPP2CBP62714 309 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 PPP2CAP67775 309 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 E2F1Q01094 437 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 TFAP2DQ7Z6R9 452 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 ZNF677Q86XU0 584 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 DCP2Q8IU60 420 aaKnown RBP16.76■□□□□ 0.27
DDR1-229ENST00000396342 RYBPQ8N488 228 aaPredicted RBP16.76■□□□□ 0.27
DDR1-229ENST00000396342 HNRNPLLQ8WVV9 542 aaKnown RBP16.76■□□□□ 0.27
DDR1-229ENST00000396342 STK33Q9BYT3 514 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 ATP13A1Q9HD20 1204 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 TOR4AQ9NXH8 423 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 VPS51Q9UID3 782 aa16.76■□□□□ 0.27
DDR1-229ENST00000396342 A0A1W2PQU0 124 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 ILVBLA1L0T0 632 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 FAM149AA5PLN7 773 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms