RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 HADHAP40939 763 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 PGFP49763 221 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 CSRP3P50461 194 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 ACLYP53396 1101 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 AQP5P55064 265 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 TBCCQ15814 346 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 PPM1JQ5JR12 505 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 FSTL4Q6MZW2 842 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 MSANTD2Q6P1R3 559 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 ARHGAP36Q6ZRI8 547 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 ZCCHC23Q6ZST2 131 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 SLC24A5Q71RS6 500 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 OTOP3Q7RTS5 596 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 TTC7BQ86TV6 843 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 ALYREFQ86V81 257 aaKnown RBP17.11■□□□□ 0.33
NUP50-202ENST00000396096 COLGALT2Q8IYK4 626 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
NUP50-202ENST00000396096 HHIPL1Q96JK4 782 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 FCRL2Q96LA5 508 aaPredicted RBP17.11■□□□□ 0.33
NUP50-202ENST00000396096 AGAP2Q99490 1192 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 TACO1Q9BSH4 297 aaKnown RBP17.11■□□□□ 0.33
NUP50-202ENST00000396096 CADM1Q9BY67 442 aaKnown RBP17.11■□□□□ 0.33
NUP50-202ENST00000396096 NMUR1Q9HB89 426 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 GLOD4Q9HC38 313 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 CHRAC1Q9NRG0 131 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 NYNRINQ9P2P1 1898 aaKnown RBP17.11■□□□□ 0.33
NUP50-202ENST00000396096 COPG2Q9UBF2 871 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 SFMBT1Q9UHJ3 866 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 SCML2Q9UQR0 700 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 DFFAO00273 331 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 CKBP12277 381 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 SLC1A6P48664 564 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 IRX4P78413 519 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 CAP1Q01518 475 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 MPP3Q13368 585 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 SLC39A12Q504Y0 691 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 HSP90AA5PQ58FG0 334 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 CLLU1OSQ5K130 101 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 MAP3K21Q5TCX8 1036 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 PDPK2PQ6A1A2 396 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 TIGD7Q6NT04 549 aaPredicted RBP17.1■□□□□ 0.33
NUP50-202ENST00000396096 RNF180Q86T96 592 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 ZNF280BQ86YH2 543 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 PIWIL2Q8TC59 973 aaKnown RBP17.1■□□□□ 0.33
NUP50-202ENST00000396096 C8orf48Q96LL4 319 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 C1orf74Q96LT6 269 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 SERPINB11Q96P15 392 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 APOL2Q9BQE5 337 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 SLC39A8Q9C0K1 460 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 C20orf96Q9NUD7 363 aaPredicted RBP17.1■□□□□ 0.33
NUP50-202ENST00000396096 NOP53Q9NZM5 478 aaKnown RBP17.1■□□□□ 0.33
NUP50-202ENST00000396096 SORCS3Q9UPU3 1222 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 L3MBTL1Q9Y468 752 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 GSC2O15499 205 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 MSI1O43347 362 aaKnown RBP17.1■□□□□ 0.33
NUP50-202ENST00000396096 ITM2AO43736 263 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 ESRRAP11474 423 aaPredicted RBP17.1■□□□□ 0.33
NUP50-202ENST00000396096 ELNP15502 786 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 NMBRP28336 390 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 NFE2Q16621 373 aaPredicted RBP17.1■□□□□ 0.33
NUP50-202ENST00000396096 NOMO2Q5JPE7 1267 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 PCID2Q5JVF3 399 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 CMC1Q7Z7K0 106 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 MON1AQ86VX9 555 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 WDR75Q8IWA0 830 aaKnown RBP17.1■□□□□ 0.33
NUP50-202ENST00000396096 RTL3Q8N8U3 475 aaKnown RBP17.1■□□□□ 0.33
NUP50-202ENST00000396096 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 LINC01599Q8WXQ3 324 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 ZNF778Q96MU6 729 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 TBL1YQ9BQ87 522 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 MMADHCQ9H3L0 296 aaPredicted RBP17.1■□□□□ 0.33
NUP50-202ENST00000396096 FAM96AQ9H5X1 160 aa17.1■□□□□ 0.33
NUP50-202ENST00000396096 A0A1W2PQH9 124 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 PEX11AO75192 247 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 SERPINA6P08185 405 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 OR4Q2P0C623 313 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 ALOX15P16050 662 aaPredicted RBP17.09■□□□□ 0.33
NUP50-202ENST00000396096 TPH1P17752 444 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 KCNA4P22459 653 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 ADRA1AP35348 466 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 HARS2P49590 506 aaKnown RBP17.09■□□□□ 0.33
NUP50-202ENST00000396096 GEMP55040 296 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 MLLT6P55198 1093 aaPredicted RBP17.09■□□□□ 0.33
NUP50-202ENST00000396096 MBTPS1Q14703 1052 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 ARMC3Q5W041 872 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 C10orf107Q8IVU9 208 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 USP33Q8TEY7 942 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 PTCD2Q8WV60 388 aaKnown RBP17.09■□□□□ 0.33
NUP50-202ENST00000396096 FATE1Q969F0 183 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 SLC39A13Q96H72 371 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 ZNF419Q96HQ0 510 aaPredicted RBP17.09■□□□□ 0.33
NUP50-202ENST00000396096 RNPEPL1Q9HAU8 725 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 MRM3Q9HC36 420 aaKnown RBP17.09■□□□□ 0.33
NUP50-202ENST00000396096 UBP1Q9NZI7 540 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 PPARGC1AQ9UBK2 798 aaKnown RBP17.09■□□□□ 0.33
NUP50-202ENST00000396096 TLR6Q9Y2C9 796 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 DNAJC16Q9Y2G8 782 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 HS3ST4Q9Y661 456 aa17.09■□□□□ 0.33
NUP50-202ENST00000396096 E9PAM4 449 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 CPA3P15088 417 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms