RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 Q6ZVU0 165 aa16.61■□□□□ 0.25
CXCL12-206ENST00000395795 ZNF677Q86XU0 584 aa16.61■□□□□ 0.25
CXCL12-206ENST00000395795 CHCHD4Q8N4Q1 142 aa16.61■□□□□ 0.25
CXCL12-206ENST00000395795 KDF1Q8NAX2 398 aaPredicted RBP16.61■□□□□ 0.25
CXCL12-206ENST00000395795 SPAG5Q96R06 1193 aa16.61■□□□□ 0.25
CXCL12-206ENST00000395795 NLRC4Q9NPP4 1024 aa16.61■□□□□ 0.25
CXCL12-206ENST00000395795 ARHGAP20Q9P2F6 1191 aa16.61■□□□□ 0.25
CXCL12-206ENST00000395795 VPS51Q9UID3 782 aa16.61■□□□□ 0.25
CXCL12-206ENST00000395795 STAP1Q9ULZ2 295 aa16.61■□□□□ 0.25
CXCL12-206ENST00000395795 NEUROG3Q9Y4Z2 214 aa16.61■□□□□ 0.25
CXCL12-206ENST00000395795 AKAP13Q12802 2813 aa16.61■□□□□ 0.25
CXCL12-206ENST00000395795 TCRBV5S1A1TA0A578 114 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 FAM47DPA6NHR8 397 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 H0Y8X5 98 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 MCF2LO15068 1137 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 SMAD6O43541 496 aaKnown RBP16.6■□□□□ 0.25
CXCL12-206ENST00000395795 RNASEH1O60930 286 aaKnown RBP16.6■□□□□ 0.25
CXCL12-206ENST00000395795 CER1O95813 267 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 ADH1BP00325 375 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 F9P00740 461 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 GLDCP23378 1020 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 TAS2R38P59533 333 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 RACK1P63244 317 aaKnown RBP16.6■□□□□ 0.25
CXCL12-206ENST00000395795 HNRNPDQ14103 355 aaKnown RBP16.6■□□□□ 0.25
CXCL12-206ENST00000395795 SYCP1Q15431 976 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 CCDC14Q49A88 953 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 AGBL4Q5VU57 503 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 IL27RAQ6UWB1 636 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 JOSD2Q8TAC2 188 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 SLC30A5Q8TAD4 765 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 ADAMTS14Q8WXS8 1223 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 HAPLN3Q96S86 360 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 METTL5Q9NRN9 209 aaKnown RBP16.6■□□□□ 0.25
CXCL12-206ENST00000395795 VPS28Q9UK41 221 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 NCKAP1Q9Y2A7 1128 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 MSRB2Q9Y3D2 182 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 DOCK9Q9BZ29 2069 aa16.6■□□□□ 0.25
CXCL12-206ENST00000395795 C2CD4BA6NLJ0 364 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 LGALS16A8MUM7 142 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 E9PAM4 449 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 VILLO15195 856 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 RTN2O75298 545 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 CD160O95971 181 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 IL1BP01584 269 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 FTH1P19P0C7X4 201 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 C15orf59Q2T9L4 293 aaPredicted RBP16.59■□□□□ 0.25
CXCL12-206ENST00000395795 SND1Q7KZF4 910 aaKnown RBP eCLIP16.59■□□□□ 0.25
CXCL12-206ENST00000395795 PHLDB2Q86SQ0 1253 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 SETD3Q86TU7 594 aaPredicted RBP16.59■□□□□ 0.25
CXCL12-206ENST00000395795 FAM131BQ86XD5 332 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 PNPLA1Q8N8W4 532 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 OR2A12Q8NGT7 310 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 CENPIQ92674 756 aaPredicted RBP16.59■□□□□ 0.25
CXCL12-206ENST00000395795 OMDQ99983 421 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 PDCL3Q9H2J4 239 aa16.59■□□□□ 0.25
CXCL12-206ENST00000395795 PLXNB3Q9ULL4 1909 aa16.58■□□□□ 0.25
CXCL12-206ENST00000395795 PLRG1O43660 514 aaKnown RBP16.58■□□□□ 0.24
CXCL12-206ENST00000395795 PCDHGA12O60330 932 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 RDXP35241 583 aaKnown RBP16.58■□□□□ 0.24
CXCL12-206ENST00000395795 GSCP56915 257 aaPredicted RBP16.58■□□□□ 0.24
CXCL12-206ENST00000395795 CNTN1Q12860 1018 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 PRAMEF14Q5SWL7 426 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.58■□□□□ 0.24
CXCL12-206ENST00000395795 TFAP2DQ7Z6R9 452 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 DCAF4L2Q8NA75 395 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 OR7D4Q8NG98 312 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 OR14C36Q8NHC7 312 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 GANCQ8TET4 914 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 RXFP2Q8WXD0 754 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 ERGIC2Q96RQ1 377 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 C11orf70Q9BRQ4 267 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 SYT11Q9BT88 431 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 NDFIP2Q9NV92 336 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 CHD5Q8TDI0 1954 aa16.58■□□□□ 0.24
CXCL12-206ENST00000395795 TP53BP1Q12888 1972 aaPredicted RBP16.57■□□□□ 0.24
CXCL12-206ENST00000395795 LRRC72A6NJI9 287 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 FAM72CH0Y354 149 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 ALOX15BO15296 676 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 TRIM16O95361 564 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 RHOCP08134 193 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 ATXN1LP0C7T5 689 aaKnown RBP16.57■□□□□ 0.24
CXCL12-206ENST00000395795 ATP1A3P13637 1013 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 RRM1P23921 792 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 NNMTP40261 264 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 HDAC4P56524 1084 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 ATP11AP98196 1134 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 MYL5Q02045 173 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 NRG1Q02297 640 aaPredicted RBP16.57■□□□□ 0.24
CXCL12-206ENST00000395795 TEAD4Q15561 434 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 POM121L1PQ3SYA9 428 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 PIP5KL1Q5T9C9 394 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 FAM72AQ5TYM5 149 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 FAM72DQ6L9T8 149 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 LINGO4Q6UY18 593 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 NLRP14Q86W24 1093 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 FAM72BQ86X60 149 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 CHST14Q8NCH0 376 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 PIP4K2CQ8TBX8 421 aa16.57■□□□□ 0.24
CXCL12-206ENST00000395795 OR8D1Q8WZ84 308 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms