RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ARSEP51690 589 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 VAV2P52735 878 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 DPYSQ14117 519 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 POLD3Q15054 466 aaPredicted RBP16.94■□□□□ 0.3
CXCL1-201ENST00000395761 HADHQ16836 314 aaKnown RBP16.94■□□□□ 0.3
CXCL1-201ENST00000395761 C9orf64Q5T6V5 341 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 IL31Q6EBC2 164 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 POLNQ7Z5Q5 900 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 TMPRSS6Q8IU80 811 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 FRMD1Q8N878 549 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 DCAF4L2Q8NA75 395 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 NETO2Q8NC67 525 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 FRS2Q8WU20 508 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 PTPRN2Q92932 1015 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 TRIM44Q96DX7 344 aaPredicted RBP16.94■□□□□ 0.3
CXCL1-201ENST00000395761 DESI2Q9BSY9 194 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 C2orf49Q9BVC5 232 aaPredicted RBP16.94■□□□□ 0.3
CXCL1-201ENST00000395761 ACE2Q9BYF1 805 aaPredicted RBP16.94■□□□□ 0.3
CXCL1-201ENST00000395761 LACRTQ9GZZ8 138 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 KLC2Q9H0B6 622 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 MAGEH1Q9H213 219 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 PCDH18Q9HCL0 1135 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 KLHL11Q9NVR0 708 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 SLC25A13Q9UJS0 675 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 MFHAS1Q9Y4C4 1052 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 ACTL7AQ9Y615 435 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 A0A0U1RQJ8 604 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 BTNL10A8MVZ5 291 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 RASA4BC9J798 803 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 H3BRJ5 948 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 ZBTB24O43167 697 aaPredicted RBP16.93■□□□□ 0.3
CXCL1-201ENST00000395761 RASA4O43374 803 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 SMAD6O43541 496 aaKnown RBP16.93■□□□□ 0.3
CXCL1-201ENST00000395761 ATP9BO43861 1147 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 RPP40O75818 363 aaKnown RBP16.93■□□□□ 0.3
CXCL1-201ENST00000395761 CCDC175P0C221 793 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 SRCP12931 536 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 IL4RP24394 825 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 VASPP50552 380 aaPredicted RBP16.93■□□□□ 0.3
CXCL1-201ENST00000395761 ARF5P84085 180 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 ACCSLQ4AC99 568 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 LEKR1Q6ZMV7 388 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 CACUL1Q86Y37 369 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 UMODL1-AS1Q8N2C9 162 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 SH2D3CQ8N5H7 860 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 OR2T3Q8NH03 318 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 FAM71BQ8TC56 605 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 GAB3Q8WWW8 586 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 TSC1Q92574 1164 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 CELF6Q96J87 481 aaKnown RBP16.93■□□□□ 0.3
CXCL1-201ENST00000395761 CSPG4P5Q96PW8 444 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 GOLPH3Q9H4A6 298 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 PRDM16Q9HAZ2 1276 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 CD93Q9NPY3 652 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 KCND1Q9NSA2 647 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 ETNK2Q9NVF9 386 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 HS3ST2Q9Y278 367 aa16.93■□□□□ 0.3
CXCL1-201ENST00000395761 DMDP11532 3685 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 A0A0A6YYK5 440 aaPredicted RBP16.92■□□□□ 0.3
CXCL1-201ENST00000395761 EDDM13A0A1B0GTR0 161 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 PROB1E7EW31 1015 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 BUB1BO60566 1050 aaPredicted RBP16.92■□□□□ 0.3
CXCL1-201ENST00000395761 CD160O95971 181 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 COMTP21964 271 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 CNR2P34972 360 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 DEKP35659 375 aaKnown RBP16.92■□□□□ 0.3
CXCL1-201ENST00000395761 NNMTP40261 264 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 ARL4AP40617 200 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 ZNF135P52742 658 aaPredicted RBP16.92■□□□□ 0.3
CXCL1-201ENST00000395761 HADHBP55084 474 aaKnown RBP16.92■□□□□ 0.3
CXCL1-201ENST00000395761 CDH6P55285 790 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 MMRN1Q13201 1228 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 SIM2Q14190 667 aaPredicted RBP16.92■□□□□ 0.3
CXCL1-201ENST00000395761 KRT81Q14533 505 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 DLG2Q15700 870 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 MAP7D1Q3KQU3 841 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 USP39Q53GS9 565 aaKnown RBP16.92■□□□□ 0.3
CXCL1-201ENST00000395761 KIAA1324Q6UXG2 1013 aaKnown RBP16.92■□□□□ 0.3
CXCL1-201ENST00000395761 STK40Q8N2I9 435 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 FAM160A2Q8N612 972 aaPredicted RBP16.92■□□□□ 0.3
CXCL1-201ENST00000395761 ATP11CQ8NB49 1132 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 SUMF1Q8NBK3 374 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 HMCESQ96FZ2 354 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 SLC39A8Q9C0K1 460 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 PYCARDQ9ULZ3 195 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 PPP2R2CQ9Y2T4 447 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 FANCMQ8IYD8 2048 aa16.92■□□□□ 0.3
CXCL1-201ENST00000395761 CKAP5Q14008 2032 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
CXCL1-201ENST00000395761 BUB1O43683 1085 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 KDELR3O43731 214 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 KRT7P08729 469 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 TNNT1P13805 278 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 BCKDHBP21953 392 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 ETFBP38117 255 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 YBEYP58557 167 aaPredicted RBP16.91■□□□□ 0.3
CXCL1-201ENST00000395761 RPS14P62263 151 aaKnown RBP16.91■□□□□ 0.3
CXCL1-201ENST00000395761 DPYSL3Q14195 570 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 LPAL2Q16609 132 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 AFMIDQ63HM1 303 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms